BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC17ZD11FM1.SCF screened BAC_end (960 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1254 1622 0.0 >3x_Contig1254 Length = 5494 Score = 1622 bits (818), Expect = 0.0 Identities = 863/874 (98%), Gaps = 3/874 (0%) Strand = Plus / Plus Query: 87 ccaccatgttggattcatcgagaatcatgcaaacttttttattctcaactccactttcca 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2369 ccaccatgttggattcatcgagaatcatgcaaacttttttattctcaactccactttcca 2428 Query: 147 ctagaacatgcctcaaaaaggcatcaaattccaatagattgtaatttcggtgcacaaggg 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2429 ctagaacatgcctcaaaaaggcatcaaattccaatagattgtaatttcggtgcacaaggg 2488 Query: 207 gaattctgacattatttttcgtttaaccaagcaacaaaccttgtaatggttgttttcccg 266 |||||||||||| | || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2489 gaattctgacatcaattc-cgtttaaccaagcaacaaaccttgtaatggttgttttcccg 2547 Query: 267 ctgccgctgggtgcaactaatataccgtgaccttgaacttgtttcaaaattctgtctaca 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2548 ctgccgctgggtgcaactaatataccgtgaccttgaacttgtttcaaaattctgtctaca 2607 Query: 327 tttaacatcgcataaagcatctcattatgaagaattatatcatagctcaaaacttcttca 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2608 tttaacatcgcataaagcatctcattatgaagaattatatcatagctcaaaacttcttca 2667 Query: 387 caaaaagtctttaatctctcagaaacaaaacttcgaattttgttcaaatctgattgctca 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2668 caaaaagtctttaatctctcagaaacaaaacttcgaattttgttcaaatctgattgctca 2727 Query: 447 tatttcatgttcaaccagttgcagaaaacgaatgatggttgaataatatctgttatattt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2728 tatttcatgttcaaccagttgcagaaaacgaatgatggttgaataatatctgttatattt 2787 Query: 507 tgtaacgggaattccgatgaaacggcatcaactaagaatttatcaaacagatgtcgttct 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2788 tgtaacgggaattccgatgaaacggcatcaactaagaatttatcaaacagatgtcgttct 2847 Query: 567 tcttcggacactaatctgtctgaaaatatccgtctagactcataggcccatatttttatt 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2848 tcttcggacactaatctgtctgaaaatatccgtctagactcataggcccatatttttatt 2907 Query: 627 aattgaggtaagtcgaccatttcagagctgctgatggcatgatagacacctctcacccat 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2908 aattgaggtaagtcgaccatttcagagctgctgatggcatgatagacacctctcacccat 2967 Query: 687 ctagtaagttctctgggagagaaaatgtaatgatattgctgttgtacagtgaattgtttt 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2968 ctagtaagttctctgggagagaaaatgtaatgatattgctgttgtacagtgaattgtttt 3027 Query: 747 ttacattcaaaatagatctcaacagacactctggcaaggttatcggcatagtcctttttg 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3028 ttacattcaaaatagatctcaacagacactctggcaaggttatcggcatagtcctttttg 3087 Query: 807 atagaactagcttttaagacggatctgaaaaaagtttgatagatatgaagtaaagattcc 866 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3088 atagaactagctttaaggacggatctgaaaaaagtttgatagatatgaagtaaagattcc 3147 Query: 867 tttgaggggtagtcaaccatgattatggcagcatggcgagtaaattctttgggtcatttt 926 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 3148 tttgaggggtagtcaaccatgattatggcagcatggcgagtaaa-tcttttggtcatttt 3206 Query: 927 gctttttcccggatcacttaaatggattacaggc 960 |||| |||||||||||| || ||||||||||||| Sbjct: 3207 gcttcttcccggatcac-tagatggattacaggc 3239 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7215 Number of Sequences: 1807 Number of extensions: 7215 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 960 length of database: 10,358,551 effective HSP length: 16 effective length of query: 944 effective length of database: 10,329,639 effective search space: 9751179216 effective search space used: 9751179216 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)