BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC17ZE09FM1.SCF screened BAC_end
         (987 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1485                                                        1606   0.0  

>3x_Contig1485 
          Length = 9830

 Score = 1606 bits (810), Expect = 0.0
 Identities = 890/907 (98%), Gaps = 9/907 (0%)
 Strand = Plus / Plus

                                                                        
Query: 86   ctacttgatatataccctatcaatgtgccacaaattaccataaatgaggatgaagtgaat 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8208 ctacttgatatataccctatcaatgtgccacaaattaccataaatgaggatgaagtgaat 8267

                                                                        
Query: 146  gagacatggaatcaagaactagaagcgttaaaaagcatttatgagtctaacttcgaacaa 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8268 gagacatggaatcaagaactagaagcgttaaaaagcatttatgagtctaacttcgaacaa 8327

                                                                        
Query: 206  ctcaacgctagttcttacaagatcaatctcaacgatgagttcaaaatcaaactgaaggtc 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8328 ctcaacgctagttcttacaagatcaatctcaacgatgagttcaaaatcaaactgaaggtc 8387

                                                                        
Query: 266  tacaagacaaagtcctacccacaaactcttcctggtattgtcgtgtccacattcgacaaa 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8388 tacaagacaaagtcctacccacaaactcttcctggtattgtcgtgtccacattcgacaaa 8447

                                                                        
Query: 326  tcatacaagcttccaaattacataaagctaacaattctagaaaagcttttacattttctt 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8448 tcatacaagcttccaaattacataaagctaacaattctagaaaagcttttacattttctt 8507

                                                                        
Query: 386  gaagagtctcaactaattggtgacatgtgcgtttaccatattgtcgattggctccagcaa 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8508 gaagagtctcaactaattggtgacatgtgcgtttaccatattgtcgattggctccagcaa 8567

                                                                        
Query: 446  aatttatctgagattatcgaaaatcctggtccgttactaacaaaagaacgcattgaaatc 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8568 aatttatctgagattatcgaaaatcctggtccgttactaacaaaagaacgcattgaaatc 8627

                                                                        
Query: 506  acttctaataatttgatcaaaagcactaataaaaaaagaagattcaatgccagaacctct 565
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 8628 acttctaataatttgatcaaaagcactaataaaaaaagaagattcaatgccagagcctct 8687

                                                                        
Query: 566  aaattgtcgaatcaagagg-tttcagagttggaagatgaatatagaaagaggcagaaaag 624
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 8688 aaattgtcgaatcaagaggttttcagagttggaagatgaatatagaaagaggcagaaaag 8747

                                                                        
Query: 625  taatgaattccatactatgagggaacagcgctcaaagctaccggcttggaaaatacagaa 684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8748 taatgaattccatactatgagggaacagcgctcaaagctaccggcttggaaaatacagaa 8807

                                                                        
Query: 685  ttctatcgtagagcttataaattctaatgatgttgttcttattacaggtgaaactggttc 744
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8808 ttctatcgtagagcttataaattctaatgatgttgttcttattacaggtgaaactggttc 8867

                                                                        
Query: 745  gggtaaatcaacacaggtcgttcaatttgtccttgataatttaatgcaacatggcgattt 804
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8868 gggtaaatcaacacaggtcgttcaatttgtccttgataatttaatgcaacatggcgattt 8927

                                                                        
Query: 805  gaacaagacgtccataatctgcacacagccaagaaagatatctgncattggtctagcgga 864
            ||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||
Sbjct: 8928 gaacaagacgtccataatctgcacacagccaagaaggatatctgcaattggtctagcgga 8987

                                                                        
Query: 865  gcgtgtat-acaggaacggtgtgtcaaatgtggtgatgaaagta-ggtatattattagaa 922
            |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||| |
Sbjct: 8988 gcgtgtatcacaggaacggtgtgtcaaatgtggtgatg-aagtagggtatattattag-a 9045

                                                                        
Query: 923  ggtgttaaatctgac--aaagtgctaccagnaattaattcatgacacctgggtgttcttg 980
            |||||| ||||||||  ||||||||||||| | | ||||||||||| || ||||||||||
Sbjct: 9046 ggtgtt-aatctgacaaaaagtgctaccagaattaaattcatgacaact-ggtgttcttg 9103

                   
Query: 981  ttcgtat 987
            |||||||
Sbjct: 9104 ttcgtat 9110


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7336
Number of Sequences: 1807
Number of extensions: 7336
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 987
length of database: 10,358,551
effective HSP length: 16
effective length of query: 971
effective length of database: 10,329,639
effective search space: 10030079469
effective search space used: 10030079469
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)