BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC17ZF07RM1.SCF screened BAC_end (913 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1449 1548 0.0 >3x_Contig1449 Length = 7865 Score = 1548 bits (781), Expect = 0.0 Identities = 850/869 (97%), Gaps = 3/869 (0%) Strand = Plus / Plus Query: 47 tggcgtagagcttgcacttttagacggtttagcaagtgtaggtggtgcatgtgagtgatg 106 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 6743 tggcgtagagcttgcacttgtagacggtttagcaagtgtaggtggtgcatgtgagtgatg 6802 Query: 107 ggcatgttccttcctggcattgttgaaagcatccgcttcttcccctggttcatgtaaaaa 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6803 ggcatgttccttcctggcattgttgaaagcatccgcttcttcccctggttcatgtaaaaa 6862 Query: 167 catacagttcggatttggacatggttgtcccctcaaatacgaggagcagtactttgttgt 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6863 catacagttcggatttggacatggttgtcccctcaaatacgaggagcagtactttgttgt 6922 Query: 227 accatatgctgctttcacttgatgtccatcaatatagataccatctatggcttgaataca 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6923 accatatgctgctttcacttgatgtccatcaatatagataccatctatggcttgaataca 6982 Query: 287 ttttgctgcatcgtcttttctggaaaaagtaacgtaaataccgtaacctgaatttatatg 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6983 ttttgctgcatcgtcttttctggaaaaagtaacgtaaataccgtaacctgaatttatatg 7042 Query: 347 actcgatgaatttgaaacagaatggtgctcgtgtccagtcttcttattgatgacgatctt 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7043 actcgatgaatttgaaacagaatggtgctcgtgtccagtcttcttattgatgacgatctt 7102 Query: 407 gttaatttttccatactggccaaaatacttgtccgatctcaagatggatggaagttcttc 466 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7103 gttaattttttcatactggccaaaatacttgtccgatctcaagatggatggaagttcttc 7162 Query: 467 gtaagggtaaggtggattcaacccaataacgtaaaccaaattcttctgaatgaccctcat 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7163 gtaagggtaaggtggattcaacccaataacgtaaaccaaattcttctgaatgaccctcat 7222 Query: 527 accagcaagctgtttcctattatgagtgtcattttctctacgttcacgctccctttgctt 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7223 accagcaagctgtttcctattatgagtgtcattttctctacgttcacgctccctttgctt 7282 Query: 587 acgatcacgttcttttctggcctgcttggaacgttccattttcaactcttctggagaaag 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7283 acgatcacgttcttttctggcctgcttggaacgttccattttcaactcttctggagaaag 7342 Query: 647 aacgatgtactcgacgctttcatcgtcgtactttcgacgacaagccggacatcgaccatt 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7343 aacgatgtactcgacgctttcatcgtcgtactttcgacgacaagccggacatcgaccatt 7402 Query: 707 aagctcaggattttgacgaatattgttataacaaaactgacaaatttgatattcacaagg 766 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 7403 aagctcaggattttgacgaatattgttataacaaaactgacaaatctgatatccacaagg 7462 Query: 767 acagggcttgaaatgcttatccataacatcgagtggttctatactaagtggacaccagtc 826 ||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 7463 acaaggcttgaaatgcttatccataacatcgagtggttctatacaaagtggacacaagtc 7522 Query: 827 ctttttgttattcgattagaaggacctttcgtaattttgataaagctttttgaat-tcat 885 || || || || |||| |||||||| | |||||| |||||||||||||| ||||| |||| Sbjct: 7523 ctcttcgtcatccgataagaaggacgtatcgtaa-tttgataaagctttctgaatctcat 7581 Query: 886 gctgattctgat-aacatgcggtttttcc 913 |||||||||||| ||||||||| |||||| Sbjct: 7582 gctgattctgatgaacatgcggattttcc 7610 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6201 Number of Sequences: 1807 Number of extensions: 6201 Number of successful extensions: 36 Number of sequences better than 1.0e-20: 1 length of query: 913 length of database: 10,358,551 effective HSP length: 16 effective length of query: 897 effective length of database: 10,329,639 effective search space: 9265686183 effective search space used: 9265686183 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)