BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC17ZF10RM1.SCF screened BAC_end (931 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1536 1687 0.0 >3x_Contig1536 Length = 11572 Score = 1687 bits (851), Expect = 0.0 Identities = 877/883 (99%), Gaps = 2/883 (0%) Strand = Plus / Plus Query: 50 cgtggataatgaacgagttttgtgaattaatacctcaatgtgatgttatcttaatcaaca 109 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 7934 cgtggataatgaacgagttc-gtgaattaatacctcaatgtgatgttatcttaatcaaca 7992 Query: 110 actttattttcgatgctcctttgaacaaagaagtagaaaaggttgtacaaggcctcaagg 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7993 actttattttcgatgctcctttgaacaaagaagtagaaaaggttgtacaaggcctcaagg 8052 Query: 170 ccgggtccaagataatttctttgaaaagcatacgacctcctggttacagtataaattacg 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8053 ccgggtccaagataatttctttgaaaagcatacgacctcctggttacagtataaattacg 8112 Query: 230 atgacatggacaatatcttcaaccgattacatgtagagtcattcaagctccctgaaaaca 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8113 atgacatggacaatatcttcaaccgattacatgtagagtcattcaagctccctgaaaaca 8172 Query: 290 gtgtttcatggacctacagaagtgttggtgattattatatcagtactgtattggatgcaa 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8173 gtgtttcatggacctacagaagtgttggtgattattatatcagtactgtattggatgcaa 8232 Query: 350 ttgatgagtcgattttctgtcctccgattttaggtaggattagaaaaaaagaatcaatca 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8233 ttgatgagtcgattttctgtcctccgattttaggtaggattagaaaaaaagaatcaatca 8292 Query: 410 agtataccagatagtaaagtcaatgctttagaccatgtcgttatttgctttacctgtgaa 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8293 agtataccagatagtaaagtcaatgctttagaccatgtcgttatttgctttacctgtgaa 8352 Query: 470 atagttttataagatctatttataacacaatgcaagtaatcgaatataaaaagataaaat 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8353 atagttttataagatctatttataacacaatgcaagtaatcgaatataaaaagataaaat 8412 Query: 530 caccagtaatgatacaaacagtttttttacttcttgatatgtaagttatgctaaattgca 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8413 caccagtaatgatacaaacagtttttttacttcttgatatgtaagttatgctaaattgca 8472 Query: 590 ctgtttatctatgttctgtagtatagtaatcgaattaagaagctccatagagagttttaa 649 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8473 ctgtttatctatgttctgtagtatagtaatcgaattaagaagctccatagagagttttaa 8532 Query: 650 aacgtggtttagctgggttcattttgataaagcctcttcctgaccacttaacaaagtaaa 709 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8533 aacgtggtttagctgggttcattttgataaagcctcttcctgaccacttaacaaagtaaa 8592 Query: 710 agatggtgcctgtagtttttgagtacctttcaagaaatccaactccataacgaaacagaa 769 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8593 agatggtgcctgtagtttttgagtacctttcaagaaatccaactccataacgaaacagaa 8652 Query: 770 ctccaagatgtttgcattcaactgcaaagccaagtcaccggctgcttttgcggagccacc 829 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8653 ctccaagatgtttgcattcaactgcaaagccaagtcaccggctgcttttgcggagccacc 8712 Query: 830 ggtggcaatgatatcatcgacaat-acgacgtttgaatgttcatggatagtatcagcctg 888 |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||| Sbjct: 8713 ggtggcaatgatatcatcgacaataacgacgtttgaatgttcagggatagaatcagcctg 8772 Query: 889 gatttcgaaaacatctttaccgtactccttagcataaactgcg 931 ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 8773 gatttcgaaaacatcttcaccgtactccttagcataaactgcg 8815 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7411 Number of Sequences: 1807 Number of extensions: 7411 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 931 length of database: 10,358,551 effective HSP length: 16 effective length of query: 915 effective length of database: 10,329,639 effective search space: 9451619685 effective search space used: 9451619685 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)