BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC17ZF10RM1.SCF screened BAC_end
         (931 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1536                                                        1687   0.0  

>3x_Contig1536 
          Length = 11572

 Score = 1687 bits (851), Expect = 0.0
 Identities = 877/883 (99%), Gaps = 2/883 (0%)
 Strand = Plus / Plus

                                                                        
Query: 50   cgtggataatgaacgagttttgtgaattaatacctcaatgtgatgttatcttaatcaaca 109
            |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 7934 cgtggataatgaacgagttc-gtgaattaatacctcaatgtgatgttatcttaatcaaca 7992

                                                                        
Query: 110  actttattttcgatgctcctttgaacaaagaagtagaaaaggttgtacaaggcctcaagg 169
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7993 actttattttcgatgctcctttgaacaaagaagtagaaaaggttgtacaaggcctcaagg 8052

                                                                        
Query: 170  ccgggtccaagataatttctttgaaaagcatacgacctcctggttacagtataaattacg 229
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8053 ccgggtccaagataatttctttgaaaagcatacgacctcctggttacagtataaattacg 8112

                                                                        
Query: 230  atgacatggacaatatcttcaaccgattacatgtagagtcattcaagctccctgaaaaca 289
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8113 atgacatggacaatatcttcaaccgattacatgtagagtcattcaagctccctgaaaaca 8172

                                                                        
Query: 290  gtgtttcatggacctacagaagtgttggtgattattatatcagtactgtattggatgcaa 349
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8173 gtgtttcatggacctacagaagtgttggtgattattatatcagtactgtattggatgcaa 8232

                                                                        
Query: 350  ttgatgagtcgattttctgtcctccgattttaggtaggattagaaaaaaagaatcaatca 409
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8233 ttgatgagtcgattttctgtcctccgattttaggtaggattagaaaaaaagaatcaatca 8292

                                                                        
Query: 410  agtataccagatagtaaagtcaatgctttagaccatgtcgttatttgctttacctgtgaa 469
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8293 agtataccagatagtaaagtcaatgctttagaccatgtcgttatttgctttacctgtgaa 8352

                                                                        
Query: 470  atagttttataagatctatttataacacaatgcaagtaatcgaatataaaaagataaaat 529
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8353 atagttttataagatctatttataacacaatgcaagtaatcgaatataaaaagataaaat 8412

                                                                        
Query: 530  caccagtaatgatacaaacagtttttttacttcttgatatgtaagttatgctaaattgca 589
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8413 caccagtaatgatacaaacagtttttttacttcttgatatgtaagttatgctaaattgca 8472

                                                                        
Query: 590  ctgtttatctatgttctgtagtatagtaatcgaattaagaagctccatagagagttttaa 649
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8473 ctgtttatctatgttctgtagtatagtaatcgaattaagaagctccatagagagttttaa 8532

                                                                        
Query: 650  aacgtggtttagctgggttcattttgataaagcctcttcctgaccacttaacaaagtaaa 709
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8533 aacgtggtttagctgggttcattttgataaagcctcttcctgaccacttaacaaagtaaa 8592

                                                                        
Query: 710  agatggtgcctgtagtttttgagtacctttcaagaaatccaactccataacgaaacagaa 769
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8593 agatggtgcctgtagtttttgagtacctttcaagaaatccaactccataacgaaacagaa 8652

                                                                        
Query: 770  ctccaagatgtttgcattcaactgcaaagccaagtcaccggctgcttttgcggagccacc 829
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8653 ctccaagatgtttgcattcaactgcaaagccaagtcaccggctgcttttgcggagccacc 8712

                                                                        
Query: 830  ggtggcaatgatatcatcgacaat-acgacgtttgaatgttcatggatagtatcagcctg 888
            |||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||
Sbjct: 8713 ggtggcaatgatatcatcgacaataacgacgtttgaatgttcagggatagaatcagcctg 8772

                                                       
Query: 889  gatttcgaaaacatctttaccgtactccttagcataaactgcg 931
            ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 8773 gatttcgaaaacatcttcaccgtactccttagcataaactgcg 8815


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7411
Number of Sequences: 1807
Number of extensions: 7411
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 931
length of database: 10,358,551
effective HSP length: 16
effective length of query: 915
effective length of database: 10,329,639
effective search space: 9451619685
effective search space used: 9451619685
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)