BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC17ZG06RM1.SCF screened BAC_end (944 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1635 1626 0.0 >3x_Contig1635 Length = 12349 Score = 1626 bits (820), Expect = 0.0 Identities = 875/892 (98%), Gaps = 1/892 (0%) Strand = Plus / Plus Query: 46 gctttaaatgacataatttacaattttaatatggatcatctcacctgtcatcatggtctt 105 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 7602 gctttaaatgacataatttacaatataaatatggatcatctcacctgtcatcatggtctt 7661 Query: 106 ttaggaattgtgaaggtatactaaccaattgttactctatgatctatccgaaaatccgca 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7662 ttaggaattgtgaaggtatactaaccaattgttactctatgatctatccgaaaatccgca 7721 Query: 166 aactgcattagagaaaagtacaatcgaattgcaatgaccaaaacagatgaacctaaaaag 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7722 aactgcattagagaaaagtacaatcgaattgcaatgaccaaaacagatgaacctaaaaag 7781 Query: 226 ccgaatttcttaattattgtcgccgatgatttagggtttacagatgtgtcgagttttgga 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7782 ccgaatttcttaattattgtcgccgatgatttagggtttacagatgtgtcgagttttgga 7841 Query: 286 ggtgaaatacaaacgccaaaccttgataaattgtctaaaggtggtttcagattcactggt 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7842 ggtgaaatacaaacgccaaaccttgataaattgtctaaaggtggtttcagattcactggt 7901 Query: 346 tttcatactgcatcggcatgttcgccaactagatcgatgttgttgagcggtactgacaac 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7902 tttcatactgcatcggcatgttcgccaactagatcgatgttgttgagcggtactgacaac 7961 Query: 406 catttggcaggtttgggccaaatggctgaatatgccaggcaatttccagaaaagttcaag 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7962 catttggcaggtttgggccaaatggctgaatatgccaggcaatttccagaaaagttcaag 8021 Query: 466 gataaacctggttatgaaggttatttgaactataaggttgctgcattgcctgaaatatta 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8022 gataaacctggttatgaaggttatttgaactataaggttgctgcattgcctgaaatatta 8081 Query: 526 tccccagaatattacacgctgatttcggggaaatggcaccttggattagaaaagccatat 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8082 tccccagaatattacacgctgatttcggggaaatggcaccttggattagaaaagccatat 8141 Query: 586 tggccaagtgaccgtggattccaaaaacgttttaccttgctgcctggtgcaggaaaccat 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8142 tggccaagtgaccgtggattccaaaaacgttttaccttgctgcctggtgcaggaaaccat 8201 Query: 646 ttcaaatgcaatttggatagcaagtttcttctcccatggatttatcaggaaaatggcgaa 705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8202 ttcaaatgcaatttggatagcaagtttcttctcccatggatttatcaggaaaatggcgaa 8261 Query: 706 agggtagaccataacaagtttccagaatacttttattccaccacttacttcacagataaa 765 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 8262 agggtagaccataacaagtttccagaaaacttttattccaccacttacttcacagataaa 8321 Query: 766 tttttggtatatttgaaggatgatgaagaaagaaaagttcg-ccattctttgtccagttg 824 ||||||| ||||||||||||||||||||||||||||| ||| |||||||||| ||||||| Sbjct: 8322 tttttggaatatttgaaggatgatgaagaaagaaaaggtcgcccattctttggccagttg 8381 Query: 825 acctacacagctccacattggccattacaggctcctgctgaaactatcgcaatatacaaa 884 ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 8382 acctacacagctccacattggccattacaggctcctgctgagactatcgcaaaatacaaa 8441 Query: 885 ggtaagttttagggtggttcccaggcattgaaaaaaacaagattggaaagag 936 ||||||| | | |||||| |||||||||||| || | |||||||||||||| Sbjct: 8442 ggtaagtataatggtggtccccaggcattgagaagacaaagattggaaagag 8493 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7201 Number of Sequences: 1807 Number of extensions: 7201 Number of successful extensions: 37 Number of sequences better than 1.0e-20: 1 length of query: 944 length of database: 10,358,551 effective HSP length: 16 effective length of query: 928 effective length of database: 10,329,639 effective search space: 9585904992 effective search space used: 9585904992 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)