BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC17ZG08FM1.SCF screened BAC_end
         (925 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1444                                                        1516   0.0  

>3x_Contig1444 
          Length = 7580

 Score = 1516 bits (765), Expect = 0.0
 Identities = 821/838 (97%), Gaps = 2/838 (0%)
 Strand = Plus / Plus

                                                                        
Query: 87   cttcgacaatgcatcattcaaaaagaaagtcattcggccatactcatcggtcctcgatcc 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4135 cttcgacaatgcatcattcaaaaagaaagtcattcggccatactcatcggtcctcgatcc 4194

                                                                        
Query: 147  aattataaagatatgataataaagcatcatttggaggctttaagatcgacacacaacgaa 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4195 aattataaagatatgataataaagcatcatttggaggctttaagatcgacacacaacgaa 4254

                                                                        
Query: 207  caattcattgttatcaacttaaatggctctttacattcggaaaactctgcaattaacagt 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4255 caattcattgttatcaacttaaatggctctttacattcggaaaactctgcaattaacagt 4314

                                                                        
Query: 267  attgctgaacaattagaattcgaacttgcaaacagaaacgttaattcatcaaaaaaagtt 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4315 attgctgaacaattagaattcgaacttgcaaacagaaacgttaattcatcaaaaaaagtt 4374

                                                                        
Query: 327  aaagcagaagaattaggtttatctgaaggtactttgacagaagtctttgataacattcta 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4375 aaagcagaagaattaggtttatctgaaggtactttgacagaagtctttgataacattcta 4434

                                                                        
Query: 387  agattgttggactcatttactgtgactcctctaaagggtgtacactcacagaaagaaaaa 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4435 agattgttggactcatttactgtgactcctctaaagggtgtacactcacagaaagaaaaa 4494

                                                                        
Query: 447  tcagagcacgtaacgctagtgttcatatttgatgaaattgacaaatttgctggaccagtg 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4495 tcagagcacgtaacgctagtgttcatatttgatgaaattgacaaatttgctggaccagtg 4554

                                                                        
Query: 507  agacagacacttttgtataatttatttgacctagtagagacttcaaggataccagtttgt 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4555 agacagacacttttgtataatttatttgacctagtagagacttcaaggataccagtttgt 4614

                                                                        
Query: 567  gttcttggtcttactacaaagttggcaatcatgcaatttcttgaaaacagagtgaaatcc 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4615 gttcttggtcttactacaaagttggcaatcatgcaatttcttgaaaacagagtgaaatcc 4674

                                                                        
Query: 627  cggttttctcagcgaatcatatatatgccatcaatctcggattatgatcaattcaagcat 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4675 cggttttctcagcgaatcatatatatgccatcaatctcggattatgatcaattcaagcat 4734

                                                                        
Query: 687  gtattcaaagagctcttagaggtggatgattcaacaattcctgatcagcttcgatggaac 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4735 gtattcaaagagctcttagaggtggatgattcaacaattcctgatcagcttcgatggaac 4794

                                                                        
Query: 747  cagttcttggatgagacttt-aaaaatgacgattcagagatttctcgtattctgcgttag 805
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 4795 cagttcttggatgagactttaaaaaatgacgattcagagatttctcgtattctgcgtcag 4854

                                                                        
Query: 806  aactacgagaaaactcaagatatacaactattacanaacgccattatttccacanttgcc 865
            |||||||||||     ||||||||||||||||||| ||||||||  || ||||| |||||
Sbjct: 4855 aactacgagaacttcaaagatatacaactattacaaaacgccatatttcccacagttgcc 4914

                                                                      
Query: 866  ttgtcctaaacatattctgtactagttganagcatc-aaacatgcagcaaaataaaaa 922
            |||||  |||||||||||| ||||||||| |||||| |||||||||||||||||||||
Sbjct: 4915 ttgtctaaaacatattctgaactagttgagagcatcaaaacatgcagcaaaataaaaa 4972


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7260
Number of Sequences: 1807
Number of extensions: 7260
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 925
length of database: 10,358,551
effective HSP length: 16
effective length of query: 909
effective length of database: 10,329,639
effective search space: 9389641851
effective search space used: 9389641851
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)