BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC17ZG10FM1.SCF screened BAC_end
         (952 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1043                                                        1639   0.0  

>3x_Contig1043 
          Length = 5132

 Score = 1639 bits (827), Expect = 0.0
 Identities = 860/868 (99%), Gaps = 3/868 (0%)
 Strand = Plus / Plus

                                                                        
Query: 87   acccccaattgttactccaaaacgaaagatccgccttcattaagtgctattcgttatggg 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2509 acccccaattgttactccaaaacgaaagatccgccttcattaagtgctattcgttatggg 2568

                                                                        
Query: 147  gctccataaatgagtacatgatggacggtggtagagtaaaaaggtcggctgaggttccat 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2569 gctccataaatgagtacatgatggacggtggtagagtaaaaaggtcggctgaggttccat 2628

                                                                        
Query: 207  gggatttagaaaactctactgttgggaaaataacaaaagaggtggatgatttctggaatg 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2629 gggatttagaaaactctactgttgggaaaataacaaaagaggtggatgatttctggaatg 2688

                                                                        
Query: 267  tgatacctgcggaatggaaatgggggaattttgattatgccagtcaacgcccatatcata 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2689 tgatacctgcggaatggaaatgggggaattttgattatgccagtcaacgcccatatcata 2748

                                                                        
Query: 327  tcaaaaagcttttcatgataacttcaatgaattgcttgcattttttgactataatatttt 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2749 tcaaaaagcttttcatgataacttcaatgaattgcttgcattttttgactataatatttt 2808

                                                                        
Query: 387  gcattagggaatatcttccatttttaccttcaaaagaattaggtccctgcggaccaatcg 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2809 gcattagggaatatcttccatttttaccttcaaaagaattaggtccctgcggaccaatcg 2868

                                                                        
Query: 447  aaccaccttttatgccacaaccaccatacacaacctattggtcagatatgtcgagaaagt 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2869 aaccaccttttatgccacaaccaccatacacaacctattggtcagatatgtcgagaaagt 2928

                                                                        
Query: 507  gttttgcagcactacgacaactttgtgaaattttaaaggtagttttcgaaacggaatctg 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2929 gttttgcagcactacgacaactttgtgaaattttaaaggtagttttcgaaacggaatctg 2988

                                                                        
Query: 567  aaaacactaaaggatctattaatctcatcgaatcatcacctttcttctcattttgcgctt 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2989 aaaacactaaaggatctattaatctcatcgaatcatcacctttcttctcattttgcgctt 3048

                                                                        
Query: 627  ttgtttgtgctatccagtgcaattacggttcaaatttccctttcatggaccctgacgcag 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3049 ttgtttgtgctatccagtgcaattacggttcaaatttccctttcatggaccctgacgcag 3108

                                                                        
Query: 687  ctttatataagaagaataaagacanaaatctatcatattgctataaaatggtattaaaga 746
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3109 ctttatataagaagaataaagacaaaaatctatcatattgctataaaatggtattaaaga 3168

                                                                        
Query: 747  ttctcaagtcaagggagagtttttgcccagtcactaagaactggttgcatatggttttca 806
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3169 ttctcaagtcaagggagagtttttgcccagtcactaagaactggttgcatatggttttca 3228

                                                                        
Query: 807  nagttcaggagatgtataaatctgttgctggtagcaggactagcagcaa-gtagtcccga 865
             |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 3229 aagttcaggagatgtataaatctgttgctggtagcaggactagcagcaaggtagtcccga 3288

                                                                        
Query: 866  acggctcagaacaaacccaaacttatgttcctatnccagccgac-attttgaatccttat 924
            ||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||| ||
Sbjct: 3289 acggctcagaacaaacccagacttatgttcctat-ccagccgacaattttgaatcctaat 3347

                                        
Query: 925  tcatctcanaatacgttccagcgtcctg 952
            |||||||| |||||||||||||||||||
Sbjct: 3348 tcatctcaaaatacgttccagcgtcctg 3375


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6156
Number of Sequences: 1807
Number of extensions: 6156
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 952
length of database: 10,358,551
effective HSP length: 16
effective length of query: 936
effective length of database: 10,329,639
effective search space: 9668542104
effective search space used: 9668542104
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)