BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC17ZG10FM1.SCF screened BAC_end (952 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1043 1639 0.0 >3x_Contig1043 Length = 5132 Score = 1639 bits (827), Expect = 0.0 Identities = 860/868 (99%), Gaps = 3/868 (0%) Strand = Plus / Plus Query: 87 acccccaattgttactccaaaacgaaagatccgccttcattaagtgctattcgttatggg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2509 acccccaattgttactccaaaacgaaagatccgccttcattaagtgctattcgttatggg 2568 Query: 147 gctccataaatgagtacatgatggacggtggtagagtaaaaaggtcggctgaggttccat 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2569 gctccataaatgagtacatgatggacggtggtagagtaaaaaggtcggctgaggttccat 2628 Query: 207 gggatttagaaaactctactgttgggaaaataacaaaagaggtggatgatttctggaatg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2629 gggatttagaaaactctactgttgggaaaataacaaaagaggtggatgatttctggaatg 2688 Query: 267 tgatacctgcggaatggaaatgggggaattttgattatgccagtcaacgcccatatcata 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2689 tgatacctgcggaatggaaatgggggaattttgattatgccagtcaacgcccatatcata 2748 Query: 327 tcaaaaagcttttcatgataacttcaatgaattgcttgcattttttgactataatatttt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2749 tcaaaaagcttttcatgataacttcaatgaattgcttgcattttttgactataatatttt 2808 Query: 387 gcattagggaatatcttccatttttaccttcaaaagaattaggtccctgcggaccaatcg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2809 gcattagggaatatcttccatttttaccttcaaaagaattaggtccctgcggaccaatcg 2868 Query: 447 aaccaccttttatgccacaaccaccatacacaacctattggtcagatatgtcgagaaagt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2869 aaccaccttttatgccacaaccaccatacacaacctattggtcagatatgtcgagaaagt 2928 Query: 507 gttttgcagcactacgacaactttgtgaaattttaaaggtagttttcgaaacggaatctg 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2929 gttttgcagcactacgacaactttgtgaaattttaaaggtagttttcgaaacggaatctg 2988 Query: 567 aaaacactaaaggatctattaatctcatcgaatcatcacctttcttctcattttgcgctt 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2989 aaaacactaaaggatctattaatctcatcgaatcatcacctttcttctcattttgcgctt 3048 Query: 627 ttgtttgtgctatccagtgcaattacggttcaaatttccctttcatggaccctgacgcag 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3049 ttgtttgtgctatccagtgcaattacggttcaaatttccctttcatggaccctgacgcag 3108 Query: 687 ctttatataagaagaataaagacanaaatctatcatattgctataaaatggtattaaaga 746 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3109 ctttatataagaagaataaagacaaaaatctatcatattgctataaaatggtattaaaga 3168 Query: 747 ttctcaagtcaagggagagtttttgcccagtcactaagaactggttgcatatggttttca 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3169 ttctcaagtcaagggagagtttttgcccagtcactaagaactggttgcatatggttttca 3228 Query: 807 nagttcaggagatgtataaatctgttgctggtagcaggactagcagcaa-gtagtcccga 865 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 3229 aagttcaggagatgtataaatctgttgctggtagcaggactagcagcaaggtagtcccga 3288 Query: 866 acggctcagaacaaacccaaacttatgttcctatnccagccgac-attttgaatccttat 924 ||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||| || Sbjct: 3289 acggctcagaacaaacccagacttatgttcctat-ccagccgacaattttgaatcctaat 3347 Query: 925 tcatctcanaatacgttccagcgtcctg 952 |||||||| ||||||||||||||||||| Sbjct: 3348 tcatctcaaaatacgttccagcgtcctg 3375 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6156 Number of Sequences: 1807 Number of extensions: 6156 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 952 length of database: 10,358,551 effective HSP length: 16 effective length of query: 936 effective length of database: 10,329,639 effective search space: 9668542104 effective search space used: 9668542104 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)