BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC17ZG11FM1.SCF screened BAC_end (926 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1807 1628 0.0 3x_Contig1408 107 4e-23 >3x_Contig1807 Length = 66587 Score = 1628 bits (821), Expect = 0.0 Identities = 830/833 (99%) Strand = Plus / Plus Query: 87 agtgttaccacttatctgcaatatcactaccttttagtaattagtatgacgatcaaacaa 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3715 agtgttaccacttatctgcaatatcactaccttttagtaattagtatgacgatcaaacaa 3774 Query: 147 tcggtgatggctaatcgtaccgaaagaggggaagatgtgaataaattagaaacaagttgt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3775 tcggtgatggctaatcgtaccgaaagaggggaagatgtgaataaattagaaacaagttgt 3834 Query: 207 agtatggagtttgtcgaagatattttaaaatactcgagttagcgtatcttttctcatctt 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3835 agtatggagtttgtcgaagatattttaaaatactcgagttagcgtatcttttctcatctt 3894 Query: 267 aatatggatgaggacaaatctttattgatcatttattatagactaatgaatgtataatcc 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3895 aatatggatgaggacaaatctttattgatcatttattatagactaatgaatgtataatcc 3954 Query: 327 aaccactaatgattgaaatatgtgggtagccctgtaatactgtggccatctctcttcttt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3955 aaccactaatgattgaaatatgtgggtagccctgtaatactgtggccatctctcttcttt 4014 Query: 387 acaatggcaaaatgttaggagaaggacccaatggcgtgattgccaacgggttgattcttg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4015 acaatggcaaaatgttaggagaaggacccaatggcgtgattgccaacgggttgattcttg 4074 Query: 447 gatgagatctggtatagtgccatttgatatggttgaagttagtaagttttaccgttccag 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4075 gatgagatctggtatagtgccatttgatatggttgaagttagtaagttttaccgttccag 4134 Query: 507 tacaagtttctgagccacaaatggatgtaaggatacccgccacggacagtgttcaagttg 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4135 tacaagtttctgagccacaaatggatgtaaggatacccgccacggacagtgttcaagttg 4194 Query: 567 gctttgaagtgctgagcgtatacaggatcgaatctgatcatggtagtgtataatctcaaa 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4195 gctttgaagtgctgagcgtatacaggatcgaatctgatcatggtagtgtataatctcaaa 4254 Query: 627 tcggcttcagtcaattgatctcccagtagatagaatttttttaagatttcttcttcagaa 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4255 tcggcttcagtcaattgatctcccagtagatagaatttttttaagatttcttcttcagaa 4314 Query: 687 gaactaccaggcctcaagattttatacctttcctttagaatgttctccaccttgtctaag 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4315 gaactaccaggcctcaagattttatacctttcctttagaatgttctccaccttgtctaag 4374 Query: 747 ttcttgaacaaagtcagcactggcatatggatggaaagagatggagatttttgccatatg 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4375 ttcttgaacaaagtcagcactggcatatggatggaaagagatggagatttttgccatatg 4434 Query: 807 acgagtcaaacaaacccagcgaaaaggggtcatttaccccttcggccggattaaagcctt 866 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 4435 acgagtcaaacaaacccagcgaaaaggggtcattcaccccttcggccggattaaagccta 4494 Query: 867 atgatgagcttcctagtgcaggagttgaatacagatctgtcaggcaggtaccg 919 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 4495 atgatgagcttcctagtgcaggagttgaaaacagatctgtcaggcaggtaccg 4547 >3x_Contig1408 Length = 6607 Score = 107 bits (54), Expect = 4e-23 Identities = 126/150 (84%) Strand = Plus / Plus Query: 500 gttccagtacaagtttctgagccacaaatggatgtaaggatacccgccacggacagtgtt 559 |||||| || ||||||||||||||||||||||||||||| ||||| || | |||||| Sbjct: 2369 gttccaatataagtttctgagccacaaatggatgtaagggtaccccgagcgaatagtgtt 2428 Query: 560 caagttggctttgaagtgctgagcgtatacaggatcgaatctgatcatggtagtgtataa 619 ||| |||| |||||| |||||| |||||||||| || ||||| | ||||||| ||||| Sbjct: 2429 caaattggttttgaaatgctgaacgtatacagggtcaaatcttacaatggtaggatataa 2488 Query: 620 tctcaaatcggcttcagtcaattgatctcc 649 |||||| || || ||||| ||||||||||| Sbjct: 2489 tctcaagtcagcctcagttaattgatctcc 2518 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6022 Number of Sequences: 1807 Number of extensions: 6022 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 2 length of query: 926 length of database: 10,358,551 effective HSP length: 16 effective length of query: 910 effective length of database: 10,329,639 effective search space: 9399971490 effective search space used: 9399971490 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)