BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC17ZH01FM1.SCF screened BAC_end
         (973 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1522                                                        1592   0.0  

>3x_Contig1522 
          Length = 7810

 Score = 1592 bits (803), Expect = 0.0
 Identities = 862/878 (98%), Gaps = 3/878 (0%)
 Strand = Plus / Minus

                                                                        
Query: 87   ttattttagataaacaaatcgaacaatcctctaattccgtcccgctggtcatcttttgca 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6383 ttattttagataaacaaatcgaacaatcctctaattccgtcccgctggtcatcttttgca 6324

                                                                        
Query: 147  aggctttcatcttttgaatagcttctttattgaatgcattagctttccttctccaagatt 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6323 aggctttcatcttttgaatagcttctttattgaatgcattagctttccttctccaagatt 6264

                                                                        
Query: 207  tattgagctccactctcattttaacacacctgtaaatttcttccgcaccaccccggaagt 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6263 tattgagctccactctcattttaacacacctgtaaatttcttccgcaccaccccggaagt 6204

                                                                        
Query: 267  ctaatccgagttgtaatatatcgccgtcctttaacagaaaatccttggacatagtagctg 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6203 ctaatccgagttgtaatatatcgccgtcctttaacagaaaatccttggacatagtagctg 6144

                                                                        
Query: 327  gctgagaaagtctttgatgattcaagaacgtccctgatgatgatttgacatctttcacaa 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6143 gctgagaaagtctttgatgattcaagaacgtccctgatgatgatttgacatctttcacaa 6084

                                                                        
Query: 387  accaatttccattatcgtcaactttgaaaacaccatgtgtccttgagacgactttactct 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6083 accaatttccattatcgtcaactttgaaaacaccatgtgtccttgagacgactttactct 6024

                                                                        
Query: 447  tgaatacggctggatggaacggttcgggaatagaagaaatggcctctctgaccttttctg 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6023 tgaatacggctggatggaacggttcgggaatagaagaaatggcctctctgaccttttctg 5964

                                                                        
Query: 507  tgtaccttccgattaccaactgagaaccaggaccagcagttcttatgatcggatcaaaat 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5963 tgtaccttccgattaccaactgagaaccaggaccagcagttcttatgatcggatcaaaat 5904

                                                                        
Query: 567  agaaaccggggttaccagccgatgagttgtctataaatgcggtcaatcttaaagtgaata 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5903 agaaaccggggttaccagccgatgagttgtctataaatgcggtcaatcttaaagtgaata 5844

                                                                        
Query: 627  atccgtttttatccttacgatttctaacagtttcatcatctgcagcttccggctgggccc 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5843 atccgtttttatccttacgatttctaacagtttcatcatctgcagcttccggctgggccc 5784

                                                                        
Query: 687  aatcaggtgcaaagtctagatgcaacgatggcgctgatgctggccttactgctgggtata 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5783 aatcaggtgcaaagtctagatgcaacgatggcgctgatgctggccttactgctgggtata 5724

                                                                        
Query: 747  tgaaatgatgaacgtntttcagagcttgaccgttttgagggatggtaccgtgtataggag 806
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 5723 tgaaatgatgaacgtttttcagagcttgaccgttttgagggatggtaccgtgtatagga- 5665

                                                                        
Query: 807  ggggaagtgagcgggatatgatgaatatctgttgtgttattaccaccttttccattagtc 866
            |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||
Sbjct: 5664 ggggaagtgagcgggatatgatgaatatcgtttgtgttattaccaccatttccattagtc 5605

                                                                        
Query: 867  tcaatttgtcccaat-caagattgatcggtaaatggatttctgtcagtgcactatttacc 925
            ||||||||||||||| |||||||||||||||||||  || |||||||||||||| | |||
Sbjct: 5604 tcaatttgtcccaatacaagattgatcggtaaatgatttcctgtcagtgcacta-tcacc 5546

                                                  
Query: 926  cactgtggcagaaggagctccggtcaactgcgatggtt 963
             ||||  |||||| ||||||| ||||||||||||||||
Sbjct: 5545 aactggtgcagaaagagctcctgtcaactgcgatggtt 5508


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6105
Number of Sequences: 1807
Number of extensions: 6105
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 973
length of database: 10,358,551
effective HSP length: 16
effective length of query: 957
effective length of database: 10,329,639
effective search space: 9885464523
effective search space used: 9885464523
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)