BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC17ZH12FM1.SCF screened BAC_end
         (971 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1444                                                        1522   0.0  

>3x_Contig1444 
          Length = 7580

 Score = 1522 bits (768), Expect = 0.0
 Identities = 841/859 (97%), Gaps = 5/859 (0%)
 Strand = Plus / Plus

                                                                        
Query: 86   cttcgacaatgcatcattcaaaaagaaagtcattcggccatactcatcggtcctcgatcc 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4135 cttcgacaatgcatcattcaaaaagaaagtcattcggccatactcatcggtcctcgatcc 4194

                                                                        
Query: 146  aattataaagatatgataataaagcatcatttggaggctttaagatcgacacacaacgaa 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4195 aattataaagatatgataataaagcatcatttggaggctttaagatcgacacacaacgaa 4254

                                                                        
Query: 206  caattcattgttatcaacttaaatggctctttacattcggaaaactctgcaattaacagt 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4255 caattcattgttatcaacttaaatggctctttacattcggaaaactctgcaattaacagt 4314

                                                                        
Query: 266  attgctgaacaattagaattcgaacttgcaaacagaaacgttaattcatcaaaaaaagtt 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4315 attgctgaacaattagaattcgaacttgcaaacagaaacgttaattcatcaaaaaaagtt 4374

                                                                        
Query: 326  aaagcagaagaattaggtttatctgaaggtactttgacagaagtctttgataacattcta 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4375 aaagcagaagaattaggtttatctgaaggtactttgacagaagtctttgataacattcta 4434

                                                                        
Query: 386  agattgttggactcatttactgtgactcctctaaagggtgtacactcacagaaagaaaaa 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4435 agattgttggactcatttactgtgactcctctaaagggtgtacactcacagaaagaaaaa 4494

                                                                        
Query: 446  tcagagcacgtaacgctagtgttcatatttgatgaaattgacaaatttgctggaccagtg 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4495 tcagagcacgtaacgctagtgttcatatttgatgaaattgacaaatttgctggaccagtg 4554

                                                                        
Query: 506  agacagacacttttgtataatttatttgacctagtagagacttcaaggataccagtttgt 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4555 agacagacacttttgtataatttatttgacctagtagagacttcaaggataccagtttgt 4614

                                                                        
Query: 566  gttcttggtcttactacaaagttggcaatcatgcaatttcttgaaaacagagtgaaatcc 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4615 gttcttggtcttactacaaagttggcaatcatgcaatttcttgaaaacagagtgaaatcc 4674

                                                                        
Query: 626  cggttttctcagcgaatcattatatatgccatcaatctcggattatgatcaattcaagca 685
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 4675 cggttttctcagcgaatca-tatatatgccatcaatctcggattatgatcaattcaagca 4733

                                                                        
Query: 686  tgtattcaaagagctcttagaggtggatgattcaacaattcctgatcagcttcgatggaa 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4734 tgtattcaaagagctcttagaggtggatgattcaacaattcctgatcagcttcgatggaa 4793

                                                                        
Query: 746  ccagttcttggatgagacttt-aaaaatgacgattcagagatttctcgtattctgcgtca 804
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4794 ccagttcttggatgagactttaaaaaatgacgattcagagatttctcgtattctgcgtca 4853

                                                                        
Query: 805  gaactacgagaacttcaaagat-tacaactattacaaaacgccttattt-tcacagttgc 862
            |||||||||||||||||||||| |||||||||||||||||||| |||||  |||||||||
Sbjct: 4854 gaactacgagaacttcaaagatatacaactattacaaaacgccatatttcccacagttgc 4913

                                                                        
Query: 863  tttgtttaaaacatattctgaactagtnggagagcattcaaacttgcagcaaattataaa 922
             |||| |||||||||||||||||||||  ||||||||  |||| ||||||||| || |||
Sbjct: 4914 cttgtctaaaacatattctgaactagtt-gagagcatcaaaacatgcagcaaaataaaaa 4972

                               
Query: 923  agttcttgccgaattaact 941
            ||| |||| ||||| ||||
Sbjct: 4973 agtacttggcgaatcaact 4991


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8075
Number of Sequences: 1807
Number of extensions: 8075
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 971
length of database: 10,358,551
effective HSP length: 16
effective length of query: 955
effective length of database: 10,329,639
effective search space: 9864805245
effective search space used: 9864805245
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)