BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC18ZA01RM1.SCF screened BAC_end (918 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1586 1538 0.0 >3x_Contig1586 Length = 12315 Score = 1538 bits (776), Expect = 0.0 Identities = 814/825 (98%), Gaps = 2/825 (0%) Strand = Plus / Plus Query: 45 gctttcccaacgccattcatggttttcggcgccatcatgcaagtatccacttttaatacc 104 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1805 gctttcccaacgccattcatggtttacggcgccatcatgcaagtatccacttttaatacc 1864 Query: 105 actagcaatacctctgagaaataattcacaatgtcccaactgacgtgcgtttttgaacac 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1865 actagcaatacctctgagaaataattcacaatgtcccaactgacgtgcgtttttgaacac 1924 Query: 165 agttgtatcactaacccaccatggtgattgtaaaggctggaaataattcaataaataaga 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1925 agttgtatcactaacccaccatggtgattgtaaaggctggaaataattcaataaataaga 1984 Query: 225 cgaatgtgtctttgtacctttggtagcatcaaacgttagtttttcaccagcattgaacat 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1985 cgaatgtgtctttgtacctttggtagcatcaaacgttagtttttcaccagcattgaacat 2044 Query: 285 attccttaactggaattgaatataaccgtcaccttccccattaccaatgtttgttcctgt 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2045 attccttaactggaattgaatataaccgtcaccttccccattaccaatgtttgttcctgt 2104 Query: 345 tttcgcactgaatctttttattggatgtaattggataattggaactacgtcaattaccga 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2105 tttcgcactgaatctttttattggatgtaattggataattggaactacgtcaattaccga 2164 Query: 405 taatgtttctggtccagaagaaggaaaatttaggtttccatagtccctttgtgatatctg 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2165 taatgtttctggtccagaagaaggaaaatttaggtttccatagtccctttgtgatatctg 2224 Query: 465 aacaggataactacccctgctatccaaactttgcgatactgattctaccattccgttacc 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2225 aacaggataactacccctgctatccaaactttgcgatactgattctaccattccgttacc 2284 Query: 525 gaccattttataatgaaaccaatccgaatacttgcacaattgttcaaaagtatctgctnt 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2285 gaccattttataatgaaaccaatccgaatacttgcacaattgttcaaaagtatctgcttt 2344 Query: 585 attaattgtctcagaaaggtaactctgtataacatcatctcggacttgttctgccccatt 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2345 attaattgtctcagaaaggtaactctgtataacatcatctcggacttgttctgccccatt 2404 Query: 645 gagaacaacttgggacacatggataggtgtgtgcttattcttttggaatagatctagtaa 704 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2405 gagaacaacttgggacacatggataggtgtgtgcttattcttttggaatagatctagtaa 2464 Query: 705 gtaaattttcctgctgattttgtaagaactgctcttcggcggtgatcaaatccttcccat 764 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2465 gt-aattttcctgctgattttgtaagaactgctcttcggcggtgatcaaatccttcccat 2523 Query: 765 tatcgccattatgaacnctgtctttcaagcctgatggctcatgaataangttttccattg 824 |||||||||||||||| ||||||| ||||||||||||||||||||| | ||||||||||| Sbjct: 2524 tatcgccattatgaaccctgtcttccaagcctgatggctcatgaattaggttttccattg 2583 Query: 825 aggtcaattgcttacaaattagaggaaactggtcaaacccgatgg 869 |||||||||||| |||||||||| | ||||||||||||| ||||| Sbjct: 2584 aggtcaattgctaacaaattaga-gtaactggtcaaaccggatgg 2627 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7180 Number of Sequences: 1807 Number of extensions: 7180 Number of successful extensions: 35 Number of sequences better than 1.0e-20: 1 length of query: 918 length of database: 10,358,551 effective HSP length: 16 effective length of query: 902 effective length of database: 10,329,639 effective search space: 9317334378 effective search space used: 9317334378 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)