BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC18ZA02FM1.SCF screened BAC_end
         (971 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1759                                                        1542   0.0  

>3x_Contig1759 
          Length = 25622

 Score = 1542 bits (778), Expect = 0.0
 Identities = 831/845 (98%), Gaps = 5/845 (0%)
 Strand = Plus / Minus

                                                                         
Query: 89    tatatgccaacggtagtgtcagaagagaggcatactctcaccgagaatatttagacgctg 148
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10023 tatatgccaacggtagtgtcagaagagaggcatactctcaccgagaatatttagacgctg 9964

                                                                         
Query: 149   aaactggggaagcagttgataatagtcagttgtctaaggtctacacttttggcgatgaga 208
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9963  aaactggggaagcagttgataatagtcagttgtctaaggtctacacttttggcgatgaga 9904

                                                                         
Query: 209   tcatagaattaactattaagacgagaatctcaaaattcaaagcggatacagcgaacatga 268
             |||||||||||||    |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9903  tcatagaattaacag--aagacgagaatctcaaaattcaaagcggatacagcgaacatga 9846

                                                                         
Query: 269   atcatttttgaagttaataggattcaggtcaacggaacagtgtttacactattatgacaa 328
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9845  atcatttttgaagttaataggattcaggtcaacggaacagtgtttacactattatgacaa 9786

                                                                         
Query: 329   cattgacgtaccagcttttgttgtaccgaacgaggaagactatgcaggctcgatcaagac 388
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9785  cattgacgtaccagcttttgttgtaccgaacgaggaagactatgcaggctcgatcaagac 9726

                                                                         
Query: 389   actagcatcactatatagaacaatgttattcaaaaagaagtctgcaatggtctggggaaa 448
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9725  actagcatcactatatagaacaatgttattcaaaaagaagtctgcaatggtctggggaaa 9666

                                                                         
Query: 449   actacggccaaactctccaccatccatgtttgtcctaacaccaagctccaagaaagatta 508
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9665  actacggccaaactctccaccatccatgtttgtcctaacaccaagctccaagaaagatta 9606

                                                                         
Query: 509   taaccaaggtttctatctctacaaggttccatttatggaagaggtccgaaaacttcctga 568
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9605  taaccaaggtttctatctctacaaggttccatttatggaagaggtccgaaaacttcctga 9546

                                                                         
Query: 569   tttcttaaatcattctgcgttaatagaatcagatgattataaagtgatgagcaaagtgac 628
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9545  tttcttaaatcattctgcgttaatagaatcagatgattataaagtgatgagcaaagtgac 9486

                                                                         
Query: 629   agaaactttgataaacttcttcaatctcaaaaatgggtatagaccatcagattttcataa 688
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9485  agaaactttgataaacttcttcaatctcaaaaatgggtatagaccatcagattttcataa 9426

                                                                         
Query: 689   ccctgcattacaaaagcatttcaaaatattaagggaataccttttacagattgaggtgga 748
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9425  ccctgcattacaaaagcatttcaaaatattaagggaataccttttacagattgaggtgga 9366

                                                                         
Query: 749   taaatcgaaacctgaagatgaaggtgatgaaacccttcanaa-gtgaagcagatntatgc 807
             ||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||
Sbjct: 9365  taaatcgaaacctgaagatgaaggtgatgaaacccttcaaaaggtgaagcagatttatgc 9306

                                                                         
Query: 808   acgaattgccagttctgcgaaatctgatgacgtannagcacaacggttagtaaaatacct 867
             ||||||||||||||||||||||||||||||||||     |||||||||||||||||||||
Sbjct: 9305  acgaattgccagttctgcgaaatctgatgacgtaaagcaacaacggttagtaaaatacct 9246

                                                                         
Query: 868   gaaactttggaattctttctacaaccgtctgagtaacttag-agtcgat-cgaaacccac 925
             ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 9245  gaaactttggaattctttctacaaccgtctgagtaacttagaagtcgatacgaaacccac 9186

                  
Query: 926   caaaa 930
             |||||
Sbjct: 9185  caaaa 9181


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6486
Number of Sequences: 1807
Number of extensions: 6486
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 971
length of database: 10,358,551
effective HSP length: 16
effective length of query: 955
effective length of database: 10,329,639
effective search space: 9864805245
effective search space used: 9864805245
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)