BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC18ZA07RM1.SCF screened BAC_end (907 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig787 1467 0.0 >3x_Contig787 Length = 1880 Score = 1467 bits (740), Expect = 0.0 Identities = 786/800 (98%), Gaps = 1/800 (0%) Strand = Plus / Minus Query: 59 tagtcattcttcgtcgaaatcaccataatcatcgtaaaagcatcatttcaaatgttgtgg 118 |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 799 tagtcattcttcgtcgtaatcatcataatcatcgtaaaagcatcatttcaaatgttgtgg 740 Query: 119 aatattaattgtgaaatggggagaggggatgggtagtcaaataataaaggttttaaaagg 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 739 aatattaattgtgaaatggggagaggggatgggtagtcaaataataaaggttttaaaagg 680 Query: 179 aaacaaaaattaaagtttttcgtatgagtttaggggagggatggtacatcttgtttgttt 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 679 aaacaaaaattaaagtttttcgtatgagtttaggggagggatggtacatcttgtttgttt 620 Query: 239 gtctctatcttatctctataaagtgcacatgagtgtgggtgtagtcatttaatttaatgt 298 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 619 gtctctatctca-ctctataaagtgcacatgagtgtgggtgtagtcatttaatttaatgt 561 Query: 299 tttccttttttcctttttataatgctatggtgcgtgtgtgggcatgaaattgtataaagg 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 tttccttttttcctttttataatgctatggtgcgtgtgtgggcatgaaattgtataaagg 501 Query: 359 tttagtttctgttaatcattaatcaaactgaaaccttttccaattgatcatcacttggct 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 500 tttagtttctgttaatcattaatcaaactgaaaccttttccaattgatcatcacttggct 441 Query: 419 tagaagaaatagaattggccgtggaacctgtcatagcagcaacttcttccgtttggtcaa 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 tagaagaaatagaattggccgtggaacctgtcatagcagcaacttcttccgtttggtcaa 381 Query: 479 ctctttcgatataagatttcaaatgaggagaggataaatctctgtggaacttctcgtgac 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 ctctttcgatataagatttcaaatgaggagaggataaatctctgtggaacttctcgtgac 321 Query: 539 cgacaaataccaagacaaaagtgaagatgacactggaaccagtcaagatagccataactt 598 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 320 cgacaaataccaagacaaaagtgaagatgacactggaaccagtcaagatagccataactt 261 Query: 599 tagagtaatccttgtttgttacttcacctgcggagttccattcgattgggtacaaatcag 658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 260 tagagtaatccttgtttgttacttcacctgcggagttccattcgattgggtacaaatcag 201 Query: 659 ccaaatcgttttcgataacgaccgaagcggcagaagccaagttacctaattgataggcaa 718 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 ccaaatcgttttcgataacgaccgaagcggcagaagccaagttacctaattgataggcaa 141 Query: 719 gaccagagaccaaagctctagcttctggaggagataattctgaaagatggattggaagaa 778 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 140 gaccagagaccaaagctctagcttctggaggagataattcggaaagatggattggaagaa 81 Query: 779 caccccagacaccaagaatggagtacccaagcatgaaccctgcacccaacactacatgac 838 ||||||||||||||||||||||| ||| |||||||||||||||||||||||| || || Sbjct: 80 caccccagacaccaagaatggagaaccaaagcatgaaccctgcacccaacacagcagaac 21 Query: 839 ttgtccttcacatgaaagct 858 ||||| | ||||||||||| Sbjct: 20 ttgtcttcaacatgaaagct 1 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7394 Number of Sequences: 1807 Number of extensions: 7394 Number of successful extensions: 58 Number of sequences better than 1.0e-20: 1 length of query: 907 length of database: 10,358,551 effective HSP length: 16 effective length of query: 891 effective length of database: 10,329,639 effective search space: 9203708349 effective search space used: 9203708349 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)