BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC18ZA09FM1.SCF screened BAC_end (989 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1210 1524 0.0 >3x_Contig1210 Length = 6392 Score = 1524 bits (769), Expect = 0.0 Identities = 826/839 (98%), Gaps = 5/839 (0%) Strand = Plus / Minus Query: 89 gtgaataaattgtgagacaaagaaaaaaaagtaagaagagaaaaagttgtaaaacccttc 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5459 gtgaataaattgtgagacaaagaaaaaaaagtaagaagagaaaaagttgtaaaacccttc 5400 Query: 149 agtaatactaaaagagtcatcaaagaaaccgtgtcctaccacgtcaatagtttcggttaa 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5399 agtaatactaaaagagtcatcaaagaaaccgtgtcctaccacgtcaatagtttcggttaa 5340 Query: 209 catctttaattattttgggaggttggtcataacaaatatcattatatcttggtagatttt 268 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5339 catctttaattaaaatgggaggttggtcataacaaatatcattatatcttggtagatttt 5280 Query: 269 cgatggaactttatcattcttctcgaacggaaggaactaaagagagtagtgtctgggcat 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5279 cgatggaactttatcattcttctcgaacggaaggaactaaagagagtagtgtctgggcat 5220 Query: 329 gtttcaatgatatcgtatctctcagctaattacacttattgctttggttcaccaccttgt 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5219 gtttcaatgatatcgtatctctcagctaattacacttattgctttggttcaccaccttgt 5160 Query: 389 tggttagaagcgtcgttcttgtacatttgttcgaacaacttcatggaagcggtttgtaat 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5159 tggttagaagcgtcgttcttgtacatttgttcgaacaacttcatggaagcggtttgtaat 5100 Query: 449 tcttcagtcttggtcttcaactcttcagcgtcgacttcttcaccggcttgaactctagcg 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5099 tcttcagtcttggtcttcaactcttcagcgtcgacttcttcaccggcttgaactctagcg 5040 Query: 509 accaattctctcaaagcagcgacttggtccttaaccttttgagcttcagccttgtccaat 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5039 accaattctctcaaagcagcgacttggtccttaaccttttgagcttcagccttgtccaat 4980 Query: 569 ttttcttcgaattccttcaaagaagcttcggtatcgttggccaattggtcacccttgttg 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4979 ttttcttcgaattccttcaaagaagcttcggtatcgttggccaattggtcacccttgttg 4920 Query: 629 gcggtttcaatagccttctttctggtttcatcttgttctctgaacttttcagcatcgcta 688 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4919 gcggtttcaatagccttctttctggtttcatcttgttctctgaacttttcagcatcgcta 4860 Query: 689 accatntgctcgatttcagattcggacaaaccggaagaaccagcaacagtgatggaagca 748 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4859 accatttgctcgatttcagattcggacaaaccggaagaaccagcaacagtgatggaagca 4800 Query: 749 tccttgttggaagccttgtctctagcagagacgttgatgataccatcggcatcaatatcg 808 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4799 tccttgttggaagccttgtctctagcagagacgttgatgataccatcggcatcaatatcg 4740 Query: 809 aaagaaacttcgatttgtgggacacccctttgnagctggtgggataccagacaaagtgta 868 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| | Sbjct: 4739 aaagaaacttcgatttgtgggaca-ccctttggagctggtgggataccagacaaagtgaa 4681 Query: 869 gttacccgatcaacttgttgtcttctgaaccaattttcttttaaccttggaaaactctg 927 |||| ||||||||||||||||| |||| ||||||| || ||| |||||||||||||||| Sbjct: 4680 gtta-ccgatcaacttgttgtc-tctg-accaattctc-tttcaccttggaaaactctg 4626 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8315 Number of Sequences: 1807 Number of extensions: 8315 Number of successful extensions: 68 Number of sequences better than 1.0e-20: 1 length of query: 989 length of database: 10,358,551 effective HSP length: 16 effective length of query: 973 effective length of database: 10,329,639 effective search space: 10050738747 effective search space used: 10050738747 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)