BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC18ZA10RM1.SCF screened BAC_end
         (929 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig921                                                         1358   0.0  

>3x_Contig921 
          Length = 3599

 Score = 1358 bits (685), Expect = 0.0
 Identities = 797/825 (96%), Gaps = 7/825 (0%)
 Strand = Plus / Plus

                                                                        
Query: 48   aacgctgagtacacttatattcttgccgagcaaagtctttggaactatgataatgctatc 107
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2353 aacgctgagtacacttatatgcttgccgagcaaagtctttggaactatgataatgctatc 2412

                                                                        
Query: 108  caaggatttagaaacagtgcaaacaatctacccagagaggcattcatctaaaagtattga 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2413 caaggatttagaaacagtgcaaacaatctacccagagaggcattcatctaaaagtattga 2472

                                                                        
Query: 168  gctaatcatgtgcgcttctttaaaaaagaacatcttaattcattcagtataatatatagt 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2473 gctaatcatgtgcgcttctttaaaaaagaacatcttaattcattcagtataatatatagt 2532

                                                                        
Query: 228  tgcatctcacacaaataaattaaactaagtatatccatctatttatatcagttggattca 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2533 tgcatctcacacaaataaattaaactaagtatatccatctatttatatcagttggattca 2592

                                                                        
Query: 288  aggtgacttgactctgtgactattttttatcatatatcctgtttgtcacaaagtgtacgt 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2593 aggtgacttgactctgtgactattttttatcatatatcctgtttgtcacaaagtgtacgt 2652

                                                                        
Query: 348  caataaaaaaagggcctaacattcagaacattatactagccaatgaactcttaagcaaat 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2653 caataaaaaaagggcctaacattcagaacattatactagccaatgaactcttaagcaaat 2712

                                                                        
Query: 408  tacaaattgtgattataagctcactacagttttgctgaaaactcactattccaaggcaat 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2713 tacaaattgtgattataagctcactacagttttgctgaaaactcactattccaaggcaat 2772

                                                                        
Query: 468  ataactacattaaatgagatcgataccagaacctcgccaatcaaaatataatcgatttag 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2773 ataactacattaaatgagatcgataccagaacctcgccaatcaaaatataatcgatttag 2832

                                                                        
Query: 528  aaggttatttaataaggtgcataattgtgtcactttgaaaagattgaaaaggcgatggaa 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2833 aaggttatttaataaggtgcataattgtgtcactttgaaaagattgaaaaggcgatggaa 2892

                                                                        
Query: 588  cctacacaagttgaagaagagctcaaggaattcaaatcagagatctgcaatcccaataga 647
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 2893 cctacacaagttgaagaagagctcaaggaatacaaatcagagatctgcaatcccaataga 2952

                                                                        
Query: 648  ccgtattgctaatcttcctactggtatgtcgcatatatcgagtaacatgaaaccatttgc 707
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 2953 ccgtattgctaatcttcctactggtatgtcgcataaatcgagtaacatgaaacca-ttgc 3011

                                                                        
Query: 708  ttctaggatcgtttaaataaaggtcagggagaattccccaaaggtgagaattcttgtaac 767
            |||||| ||||||| ||||||||||| ||||||||| ||||||||||||||||| | |||
Sbjct: 3012 ttctagtatcgttt-aataaaggtca-ggagaattcgccaaaggtgagaattctagaaac 3069

                                                                        
Query: 768  caatggacattttggaactttgtatcaccggttgaaaatttttaatgaaaccaattgttg 827
            ||||||||||||  || | ||| |||| |||| ||||||| | |||||||| ||| | ||
Sbjct: 3070 caatggacatttgagatc-ttggatcagcggtagaaaattctcaatgaaacgaatag-tg 3127

                                                         
Query: 828  attaacgcatttgtagaagagaaatccttttcaaaaattcgaggc 872
            | |||||||| ||||| ||||| |||||| || ||||||||||||
Sbjct: 3128 aataacgcatctgtag-agagagatccttatc-aaaattcgaggc 3170


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7255
Number of Sequences: 1807
Number of extensions: 7255
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 929
length of database: 10,358,551
effective HSP length: 16
effective length of query: 913
effective length of database: 10,329,639
effective search space: 9430960407
effective search space used: 9430960407
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)