BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC18ZB05FM1.SCF screened BAC_end (931 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig641 1657 0.0 >3x_Contig641 Length = 2317 Score = 1657 bits (836), Expect = 0.0 Identities = 845/847 (99%), Gaps = 1/847 (0%) Strand = Plus / Minus Query: 85 ctggttcaattcatttcttttggtcttgttactggggcttttaccagcctgctagctgtt 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1671 ctggttcaattcatttcttttggtcttgttactggggcttttaccagcctgctagctgtt 1612 Query: 145 tttctgtaggcaaaactgtaaggggcacgtgaaatacgaaatcgtatccctccatgtctc 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1611 tttctgtaggcaaaactgtaaggggcacgtgaaatacgaaatcgtatccctccatgtctc 1552 Query: 205 ttttggcatggtatagggtaccttttcggtcctcataggttttactcaatgatatttcag 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1551 ttttggcatggtatagggtaccttttcggtcctcataggttttactcaatgatatttcag 1492 Query: 265 tgttttgctcagctaatggaatcatgacaaatttaaatgttagcatccatttaagttgaa 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1491 tgttttgctcagctaatggaatcatgacaaatttaaatgttagcatccatttaagttgaa 1432 Query: 325 atatgtttgttttaaattgactagtaatgtaagtcgtgggagagcattgaggaataagtt 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1431 atatgtttgttttaaattgactagtaatgtaagtcgtgggagagcattgaggaataagtt 1372 Query: 385 tcatgcaaatcttatcgcaattatcgaaatttgtagcgtgagtttcgtagactaaagttc 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1371 tcatgcaaatcttatcgcaattatcgaaatttgtagcgtgagtttcgtagactaaagttc 1312 Query: 445 ccgaaggcttcttctttgagatattttcatctgacgagaattttggattaatcaactcaa 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1311 ccgaaggcttcttctttgagatattttcatctgacgagaattttggattaatcaactcaa 1252 Query: 505 atgtttcgatggatgctgtcacagcagtcactttaaaattggaattatcttctacatttt 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1251 atgtttcgatggatgctgtcacagcagtcactttaaaattggaattatcttctacatttt 1192 Query: 565 tcaagtcaagtattatatcgatttgatcggaaacagagtacgctggtttggagagttcta 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1191 tcaagtcaagtattatatcgatttgatcggaaacagagtacgctggtttggagagttcta 1132 Query: 625 aattacaaatgaacttatcattcatttttacaacatactcagtttgtaatgactgcaact 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1131 aattacaaatgaacttatcattcatttttacaacatactcagtttgtaatgactgcaact 1072 Query: 685 gcgatagtagcgaagaattgctttgcgtctcatcaatagagttctctgggatacctgtaa 744 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1071 gcgatagtagcgaagaattgctttgcgtctcatcaatagagttctctgggatacctgtaa 1012 Query: 745 aataaaattgcgacaagttcattcggactgangttgagggttctgtttcaaattgttggc 804 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1011 aataaaattgcgacaagttcattcggactgaggttgagggttctgtttcaaattgttggc 952 Query: 805 ctaataatgaatcaatgggtacgtcggaatcatcattttcattccattctgagaactacg 864 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 951 ctaataatgaatcaatgggtacgtcggaatcatcattttcattccattctgag-actacg 893 Query: 865 tctttaaacttttgtttcatggcttcaatcgaagttcctgaaggtttcccgatacttgac 924 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 892 tctttaaacttttgtttcatggcttcaatcgaagttcctgaaggtttcccgatacttgac 833 Query: 925 acgctct 931 ||||||| Sbjct: 832 acgctct 826 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7029 Number of Sequences: 1807 Number of extensions: 7029 Number of successful extensions: 33 Number of sequences better than 1.0e-20: 1 length of query: 931 length of database: 10,358,551 effective HSP length: 16 effective length of query: 915 effective length of database: 10,329,639 effective search space: 9451619685 effective search space used: 9451619685 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)