BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC18ZB05RM1.SCF screened BAC_end
         (924 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1502                                                        1683   0.0  

>3x_Contig1502 
          Length = 14970

 Score = 1683 bits (849), Expect = 0.0
 Identities = 876/885 (98%)
 Strand = Plus / Plus

                                                                         
Query: 39    gcttggtgaaaaaccaggacaagttattgctcgagaagttaatcaaaccagctaaacagg 98
             |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 11658 gcttggtgaaaaaccaggacaagtcaatgctcgagaagttaatcaaaccagctaaacagg 11717

                                                                         
Query: 99    ctttgttaatgactggtaaacaaggggaagatttagctgctttcaaattgccaaagggac 158
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11718 ctttgttaatgactggtaaacaaggggaagatttagctgctttcaaattgccaaagggac 11777

                                                                         
Query: 159   caagttgtgttttaccaatatttttacatggtttaatgtatggttctggtgacgaacgtg 218
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11778 caagttgtgttttaccaatatttttacatggtttaatgtatggttctggtgacgaacgtg 11837

                                                                         
Query: 219   aggcttcagcccttgccattgcggatattgtctccaagactcctgcagcaggcttgaaat 278
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11838 aggcttcagcccttgccattgcggatattgtctccaagactcctgcagcaggcttgaaat 11897

                                                                         
Query: 279   cctatgttacagttatcactggtcctttgattcgtgttgttggagaaagattcaatagtg 338
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11898 cctatgttacagttatcactggtcctttgattcgtgttgttggagaaagattcaatagtg 11957

                                                                         
Query: 339   acatcaaggcagctatcctttatgctttgaatatcctatttgcgaaaattcctcagttgt 398
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11958 acatcaaggcagctatcctttatgctttgaatatcctatttgcgaaaattcctcagttgt 12017

                                                                         
Query: 399   tgagacctttcattcctcagttgcaaagaacgtttgtcaaatctttgtccgatccaacta 458
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12018 tgagacctttcattcctcagttgcaaagaacgtttgtcaaatctttgtccgatccaacta 12077

                                                                         
Query: 459   atgaggtattacgtcttcgtgctgccaaggcattaggaaccttaattgaataccagccta 518
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12078 atgaggtattacgtcttcgtgctgccaaggcattaggaaccttaattgaataccagccta 12137

                                                                         
Query: 519   gagttgatccattggttgtcgaactggtaacaggtgctaagcaaagtgatgatgatggtg 578
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12138 gagttgatccattggttgtcgaactggtaacaggtgctaagcaaagtgatgatgatggtg 12197

                                                                         
Query: 579   ttaagactgctatgttgaaggctttattggaagccgtatcaaaggcaggttccaaattga 638
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12198 ttaagactgctatgttgaaggctttattggaagccgtatcaaaggcaggttccaaattga 12257

                                                                         
Query: 639   accaaacctcaaaaaccaatatcttaaatttgatcgaagaagaaatgttatctgcaaatg 698
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12258 accaaacctcaaaaaccaatatcttaaatttgatcgaagaagaaatgttatctgcaaatg 12317

                                                                         
Query: 699   ataagctcgcagtggcctacgcgaaattaatcggatccttatcaagtatcttatcaaccg 758
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12318 ataagctcgcagtggcctacgcgaaattaatcggatccttatcaagtatcttatcaaccg 12377

                                                                         
Query: 759   aggaagctgcaacaatattgaaaaagcaggtgttagaaagctccttgactgaagattctg 818
             ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||
Sbjct: 12378 aggaagctgcaacaatattgaaaagcaaggtgttagaaagctccttgactgaagattctg 12437

                                                                         
Query: 819   ggtaattcggtattttgacccttaactcattcttgaaagatgctccatcacatgtttttt 878
             |  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| 
Sbjct: 12438 gtaaattcggtattttgaccctaaactcattcttgaaagatgctccatcacatgtttttg 12497

                                                          
Query: 879   gcactggactaattgatgaatgtgttaactacataattgatgcaa 923
             |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12498 gcactggactaattgatgaatgtgttaactacataattgatgcaa 12542


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7147
Number of Sequences: 1807
Number of extensions: 7147
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 924
length of database: 10,358,551
effective HSP length: 16
effective length of query: 908
effective length of database: 10,329,639
effective search space: 9379312212
effective search space used: 9379312212
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)