BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC18ZB05RM1.SCF screened BAC_end (924 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1502 1683 0.0 >3x_Contig1502 Length = 14970 Score = 1683 bits (849), Expect = 0.0 Identities = 876/885 (98%) Strand = Plus / Plus Query: 39 gcttggtgaaaaaccaggacaagttattgctcgagaagttaatcaaaccagctaaacagg 98 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 11658 gcttggtgaaaaaccaggacaagtcaatgctcgagaagttaatcaaaccagctaaacagg 11717 Query: 99 ctttgttaatgactggtaaacaaggggaagatttagctgctttcaaattgccaaagggac 158 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11718 ctttgttaatgactggtaaacaaggggaagatttagctgctttcaaattgccaaagggac 11777 Query: 159 caagttgtgttttaccaatatttttacatggtttaatgtatggttctggtgacgaacgtg 218 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11778 caagttgtgttttaccaatatttttacatggtttaatgtatggttctggtgacgaacgtg 11837 Query: 219 aggcttcagcccttgccattgcggatattgtctccaagactcctgcagcaggcttgaaat 278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11838 aggcttcagcccttgccattgcggatattgtctccaagactcctgcagcaggcttgaaat 11897 Query: 279 cctatgttacagttatcactggtcctttgattcgtgttgttggagaaagattcaatagtg 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11898 cctatgttacagttatcactggtcctttgattcgtgttgttggagaaagattcaatagtg 11957 Query: 339 acatcaaggcagctatcctttatgctttgaatatcctatttgcgaaaattcctcagttgt 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11958 acatcaaggcagctatcctttatgctttgaatatcctatttgcgaaaattcctcagttgt 12017 Query: 399 tgagacctttcattcctcagttgcaaagaacgtttgtcaaatctttgtccgatccaacta 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12018 tgagacctttcattcctcagttgcaaagaacgtttgtcaaatctttgtccgatccaacta 12077 Query: 459 atgaggtattacgtcttcgtgctgccaaggcattaggaaccttaattgaataccagccta 518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12078 atgaggtattacgtcttcgtgctgccaaggcattaggaaccttaattgaataccagccta 12137 Query: 519 gagttgatccattggttgtcgaactggtaacaggtgctaagcaaagtgatgatgatggtg 578 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12138 gagttgatccattggttgtcgaactggtaacaggtgctaagcaaagtgatgatgatggtg 12197 Query: 579 ttaagactgctatgttgaaggctttattggaagccgtatcaaaggcaggttccaaattga 638 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12198 ttaagactgctatgttgaaggctttattggaagccgtatcaaaggcaggttccaaattga 12257 Query: 639 accaaacctcaaaaaccaatatcttaaatttgatcgaagaagaaatgttatctgcaaatg 698 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12258 accaaacctcaaaaaccaatatcttaaatttgatcgaagaagaaatgttatctgcaaatg 12317 Query: 699 ataagctcgcagtggcctacgcgaaattaatcggatccttatcaagtatcttatcaaccg 758 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12318 ataagctcgcagtggcctacgcgaaattaatcggatccttatcaagtatcttatcaaccg 12377 Query: 759 aggaagctgcaacaatattgaaaaagcaggtgttagaaagctccttgactgaagattctg 818 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 12378 aggaagctgcaacaatattgaaaagcaaggtgttagaaagctccttgactgaagattctg 12437 Query: 819 ggtaattcggtattttgacccttaactcattcttgaaagatgctccatcacatgtttttt 878 | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 12438 gtaaattcggtattttgaccctaaactcattcttgaaagatgctccatcacatgtttttg 12497 Query: 879 gcactggactaattgatgaatgtgttaactacataattgatgcaa 923 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12498 gcactggactaattgatgaatgtgttaactacataattgatgcaa 12542 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7147 Number of Sequences: 1807 Number of extensions: 7147 Number of successful extensions: 44 Number of sequences better than 1.0e-20: 1 length of query: 924 length of database: 10,358,551 effective HSP length: 16 effective length of query: 908 effective length of database: 10,329,639 effective search space: 9379312212 effective search space used: 9379312212 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)