BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC18ZC06RM1.SCF screened BAC_end
         (946 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1708                                                        1655   0.0  

>3x_Contig1708 
          Length = 19451

 Score = 1655 bits (835), Expect = 0.0
 Identities = 888/901 (98%), Gaps = 4/901 (0%)
 Strand = Plus / Plus

                                                                         
Query: 48    tgacaaaaaatcgggccttgta-gatgatactttacagttattcttgaacaccagtttaa 106
             |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 17819 tgacaaaaaatcgggccttgaatgatgatactttacagttattcttgaacaccagtttaa 17878

                                                                         
Query: 107   ctactttgacgttttatgactgttcaaagttgtcatatgaaggctacaagagacttgcca 166
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17879 ctactttgacgttttatgactgttcaaagttgtcatatgaaggctacaagagacttgcca 17938

                                                                         
Query: 167   tcttttcgccgcatttagagtcgctttccttacagatgtgtggacagttaaataatgaag 226
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17939 tcttttcgccgcatttagagtcgctttccttacagatgtgtggacagttaaataatgaag 17998

                                                                         
Query: 227   ctctcttgtatctagccgaaaagctaccaaacctaaaagaactataccttgatggaccgt 286
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17999 ctctcttgtatctagccgaaaagctaccaaacctaaaagaactataccttgatggaccgt 18058

                                                                         
Query: 287   tcttaattaatgaggatacatgggttcaattcttcgaattgctaaagggtagacttactg 346
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18059 tcttaattaatgaggatacatgggttcaattcttcgaattgctaaagggtagacttactg 18118

                                                                         
Query: 347   cttttcatgtttccaatacccatagattcaatgataatgcattgtcagctatgcttcgaa 406
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18119 cttttcatgtttccaatacccatagattcaatgataatgcattgtcagctatgcttcgaa 18178

                                                                         
Query: 407   attgtggatcgtccttggaatctctaggtctagcaactctagatactgtgacaaattacg 466
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18179 attgtggatcgtccttggaatctctaggtctagcaactctagatactgtgacaaattacg 18238

                                                                         
Query: 467   ccctattaccgcaatatcttaactctcctaatttccacactttgatcttggaagagccat 526
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18239 ccctattaccgcaatatcttaactctcctaatttccacactttgatcttggaagagccat 18298

                                                                         
Query: 527   ctagagaaacagatattaatgacgaggttattataagtttgttaggatccataggccaga 586
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18299 ctagagaaacagatattaatgacgaggttattataagtttgttaggatccataggccaga 18358

                                                                         
Query: 587   accttaggaagttgtcgctcaatagatgcactggcttgactgatagctgtataattaatg 646
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18359 accttaggaagttgtcgctcaatagatgcactggcttgactgatagctgtataattaatg 18418

                                                                         
Query: 647   gatttttaccatttttgtctaactcanggcaatcaatccttacagacttggaattagaag 706
             |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 18419 gatttttaccatttttgtctaactcagggcaatcaatccttacagacttggaattagaag 18478

                                                                         
Query: 707   aattggatcagataaccaccgacggcatagttctattattctcttcgttgcagttccctt 766
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18479 aattggatcagataaccaccgacggcatagttctattattctcttcgttgcagttccctt 18538

                                                                         
Query: 767   tgttgaaaagatgtagcttgaaaagatgttttgctttggaggatgcagccgtagttgaaa 826
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 18539 tgttgaaaagatgtagcttgaaaagatgttttgctttggaggatgcagccgtagttgaat 18598

                                                                         
Query: 827   tattacttaactcctcttccaccttagaagagttgaatctaaatggtctgaaatccnt-a 885
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 18599 tattacttaactcctcttccaccttagaagagttgaatctaaatggtctgaaatccctaa 18658

                                                                         
Query: 886   catccaaaactttcacctttattgcatgttcttaaccttaagcagcttaattatagggtt 945
             ||||||||||||||||||| || ||||| || |||||| ||||||| ||| |||||||||
Sbjct: 18659 catccaaaactttcaccttcatggcatg-tcctaacctcaagcagc-taaatatagggtt 18716

              
Query: 946   t 946
             |
Sbjct: 18717 t 18717


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6462
Number of Sequences: 1807
Number of extensions: 6462
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 946
length of database: 10,358,551
effective HSP length: 16
effective length of query: 930
effective length of database: 10,329,639
effective search space: 9606564270
effective search space used: 9606564270
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)