BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC18ZC06RM1.SCF screened BAC_end (946 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1708 1655 0.0 >3x_Contig1708 Length = 19451 Score = 1655 bits (835), Expect = 0.0 Identities = 888/901 (98%), Gaps = 4/901 (0%) Strand = Plus / Plus Query: 48 tgacaaaaaatcgggccttgta-gatgatactttacagttattcttgaacaccagtttaa 106 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 17819 tgacaaaaaatcgggccttgaatgatgatactttacagttattcttgaacaccagtttaa 17878 Query: 107 ctactttgacgttttatgactgttcaaagttgtcatatgaaggctacaagagacttgcca 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17879 ctactttgacgttttatgactgttcaaagttgtcatatgaaggctacaagagacttgcca 17938 Query: 167 tcttttcgccgcatttagagtcgctttccttacagatgtgtggacagttaaataatgaag 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17939 tcttttcgccgcatttagagtcgctttccttacagatgtgtggacagttaaataatgaag 17998 Query: 227 ctctcttgtatctagccgaaaagctaccaaacctaaaagaactataccttgatggaccgt 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17999 ctctcttgtatctagccgaaaagctaccaaacctaaaagaactataccttgatggaccgt 18058 Query: 287 tcttaattaatgaggatacatgggttcaattcttcgaattgctaaagggtagacttactg 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18059 tcttaattaatgaggatacatgggttcaattcttcgaattgctaaagggtagacttactg 18118 Query: 347 cttttcatgtttccaatacccatagattcaatgataatgcattgtcagctatgcttcgaa 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18119 cttttcatgtttccaatacccatagattcaatgataatgcattgtcagctatgcttcgaa 18178 Query: 407 attgtggatcgtccttggaatctctaggtctagcaactctagatactgtgacaaattacg 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18179 attgtggatcgtccttggaatctctaggtctagcaactctagatactgtgacaaattacg 18238 Query: 467 ccctattaccgcaatatcttaactctcctaatttccacactttgatcttggaagagccat 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18239 ccctattaccgcaatatcttaactctcctaatttccacactttgatcttggaagagccat 18298 Query: 527 ctagagaaacagatattaatgacgaggttattataagtttgttaggatccataggccaga 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18299 ctagagaaacagatattaatgacgaggttattataagtttgttaggatccataggccaga 18358 Query: 587 accttaggaagttgtcgctcaatagatgcactggcttgactgatagctgtataattaatg 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18359 accttaggaagttgtcgctcaatagatgcactggcttgactgatagctgtataattaatg 18418 Query: 647 gatttttaccatttttgtctaactcanggcaatcaatccttacagacttggaattagaag 706 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 18419 gatttttaccatttttgtctaactcagggcaatcaatccttacagacttggaattagaag 18478 Query: 707 aattggatcagataaccaccgacggcatagttctattattctcttcgttgcagttccctt 766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18479 aattggatcagataaccaccgacggcatagttctattattctcttcgttgcagttccctt 18538 Query: 767 tgttgaaaagatgtagcttgaaaagatgttttgctttggaggatgcagccgtagttgaaa 826 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18539 tgttgaaaagatgtagcttgaaaagatgttttgctttggaggatgcagccgtagttgaat 18598 Query: 827 tattacttaactcctcttccaccttagaagagttgaatctaaatggtctgaaatccnt-a 885 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 18599 tattacttaactcctcttccaccttagaagagttgaatctaaatggtctgaaatccctaa 18658 Query: 886 catccaaaactttcacctttattgcatgttcttaaccttaagcagcttaattatagggtt 945 ||||||||||||||||||| || ||||| || |||||| ||||||| ||| ||||||||| Sbjct: 18659 catccaaaactttcaccttcatggcatg-tcctaacctcaagcagc-taaatatagggtt 18716 Query: 946 t 946 | Sbjct: 18717 t 18717 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6462 Number of Sequences: 1807 Number of extensions: 6462 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 946 length of database: 10,358,551 effective HSP length: 16 effective length of query: 930 effective length of database: 10,329,639 effective search space: 9606564270 effective search space used: 9606564270 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)