BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC18ZC10RM1.SCF screened BAC_end (927 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1497 1318 0.0 >3x_Contig1497 Length = 11582 Score = 1318 bits (665), Expect = 0.0 Identities = 749/773 (96%), Gaps = 3/773 (0%) Strand = Plus / Minus Query: 43 gctttaaccctttttaaaat-aggtgctattcctgattttctacggcggctcgagtaccg 101 |||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||| Sbjct: 9116 gctttaaccctttttaaaatcaggatctattcctgattttctacggcggatcgagtaccg 9057 Query: 102 atcacccagttcaaagtacaatggcagcattacccaagagaattatcaaagtatgttgaa 161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056 atcacccagttcaaagtacaatggcagcattacccaagagaattatcaaagtatgttgaa 8997 Query: 162 aatttttggaaacttacacgttcttttctatctgagtattaattaatagcgttatattta 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 8996 aatttttggaaacttacacgttcttttctatctgagtattaattaatagcgttataacta 8937 Query: 222 accaagaaaaaaaaaaatatcatttacacaggaaactgataggttagtgagcgatccggt 281 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 8936 accaagaaaaaaaaaaatatcatttacacaggaaactgaaaggttagtgagcgatccggt 8877 Query: 282 ccccggaatcactgcagaaccacatgaggataatttacgttatttccaagtgacgataga 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8876 ccccggaatcactgcagaaccacatgaggataatttacgttatttccaagtgacgataga 8817 Query: 342 gggtccgcagcaaagtccctatgaaaatggggtcttccaactagaattgttcctaccgga 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8816 gggtccgcagcaaagtccctatgaaaatggggtcttccaactagaattgttcctaccgga 8757 Query: 402 tgattatccaatggaagcaccaaaggtaaggtttttgacaaaaatataccatcccaatat 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8756 tgattatccaatggaagcaccaaaggtaaggtttttgacaaaaatataccatcccaatat 8697 Query: 462 cgatcggttaggtagaatatgtctcgatgttttgaaaaataattggtcacctgcccttca 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8696 cgatcggttaggtagaatatgtctcgatgttttgaaaaataattggtcacctgcccttca 8637 Query: 522 aatcagaacagtacttttgtccgtgcaagccttgcttgcatctccgaatccgaatgatcc 581 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8636 aatcagaacagtacttttgtccgtgcaagccttgcttgcatctccgaatccgaatgaaaa 8577 Query: 582 gttagctaatgacgtcgctgaggaatggatcaagcatgaagataccgcaattgcaaaggc 641 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 8576 gttagctaatgacgtcgctgaggaatggatcaagcatgaagataccgcaattgaaaaggc 8517 Query: 642 aaaagaatggaccatactttacgccaaacctactcaggatgaggaaccagcaaaagaata 701 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8516 aaaagaatggaccaaactttacgccaaacctactcaggatgaggaaccagcaaaagaata 8457 Query: 702 actctaatttgcaaatgatcttagc-taaattctaacttacacataccatatttttatat 760 |||| |||| | ||||||||||||| |||||||||| | ||||||||||||| ||||||| Sbjct: 8456 actcgaattagaaaatgatcttagcataaattctaaataacacataccatatatttatat 8397 Query: 761 acttgaacgtatatattcacctaaactagaggatttgctggcaacagtatgtt 813 || |||||||||||||||| ||||||||||||||| ||||| ||||| ||||| Sbjct: 8396 acatgaacgtatatattca-ctaaactagaggattagctggaaacagaatgtt 8345 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,832 Number of Sequences: 1807 Number of extensions: 12832 Number of successful extensions: 63 Number of sequences better than 1.0e-20: 1 length of query: 927 length of database: 10,358,551 effective HSP length: 16 effective length of query: 911 effective length of database: 10,329,639 effective search space: 9410301129 effective search space used: 9410301129 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)