BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC18ZC12FM1.SCF screened BAC_end (968 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1653 1651 0.0 >3x_Contig1653 Length = 14012 Score = 1651 bits (833), Expect = 0.0 Identities = 872/883 (98%), Gaps = 2/883 (0%) Strand = Plus / Plus Query: 85 tgatgtcattttgccaaaatgtctgttgtacattatatatttttaccttaatgtccagcc 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6478 tgatgtcattttgccaaaatgtctgttgtacattatatatttttaccttaatgtccagcc 6537 Query: 145 atcagttcccttcgtatttcaatcacacaactctgacaggaattaaatcatctcttttca 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6538 atcagttcccttcgtatttcaatcacacaactctgacaggaattaaatcatctcttttca 6597 Query: 205 gtcccaacgctaattgttttttcataagactcagcttggcttgcaaaattaacacgcgta 264 ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 6598 gtcccaacgctaacagtattttcataagactcagcttggcttgcaaaattaacacgcgta 6657 Query: 265 ctataggatatttggaaatgtcgctatatcatagcctagtatttgctatcttagtcgtgg 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6658 ctataggatatttggaaatgtcgctatatcatagcctagtatttgctatcttagtcgtgg 6717 Query: 325 aattgattacattgactttgttaggtcttccacttccctcgaagtttaagaaacctgtca 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6718 aattgattacattgactttgttaggtcttccacttccctcgaagtttaagaaacctgtca 6777 Query: 385 tctctgccctttcgaaacctttcttttctcctacggttcagataacaatcaaatgcttac 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6778 tctctgccctttcgaaacctttcttttctcctacggttcagataacaatcaaatgcttac 6837 Query: 445 tagcattcattctattacttttcgttgattctataaataaagtctacagcgtagagggcg 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6838 tagcattcattctattacttttcgttgattctataaataaagtctacagcgtagagggcg 6897 Query: 505 aattggataagctaaaggaagtaggtacaggtactcatcctcaaggaagaatggagattt 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6898 aattggataagctaaaggaagtaggtacaggtactcatcctcaaggaagaatggagattt 6957 Query: 565 tatcaagaaagttcttctggcagaggaacatgtacttaacgggcattactttgttcttaa 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6958 tatcaagaaagttcttctggcagaggaacatgtacttaacgggcattactttgttcttaa 7017 Query: 625 catttgtattgagccgtaccgttaaccttgtctgggagttattcgagctaaaagaggatt 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7018 catttgtattgagccgtaccgttaaccttgtctgggagttattcgagctaaaagaggatt 7077 Query: 685 atcatttgatcttgaaatcggaggaagataaactggctcctcaacaaaaggcattagaaa 744 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7078 atcatttgatcttgaaatcggaggaagataaactggctcctcaacaaaaggcattagaaa 7137 Query: 745 aagaaattgaatctgtagatgaggaaattacaagattgaaggagcangcctctgctttac 804 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 7138 aagaaattgaatctgtagatgaggaaattacaagattgaaggagcaggcctctgctttac 7197 Query: 805 agaaagagatggagtaaaaccagngaatgggatatgaccttttatgaccttacgtctata 864 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 7198 agaaagagatggagtaaaaccagggaatgggatatgaccttttatgaccttacgtctata 7257 Query: 865 t-tatatatatatataagtaagcgaaaaatatttacatgtctatgattcattgaacgttt 923 | ||||||||||||||| | |||||||||||||||||||||||||||||| |||||| || Sbjct: 7258 tgtatatatatatataactcagcgaaaaatatttacatgtctatgattcaatgaacg-tt 7316 Query: 924 gaagaccaaactttcatgatagacgccgcacgttctgacgaat 966 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 7317 gaagaccaaactttcaggatagacgccgcacgttctgacgaat 7359 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,772 Number of Sequences: 1807 Number of extensions: 10772 Number of successful extensions: 247 Number of sequences better than 1.0e-20: 1 length of query: 968 length of database: 10,358,551 effective HSP length: 16 effective length of query: 952 effective length of database: 10,329,639 effective search space: 9833816328 effective search space used: 9833816328 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)