BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC18ZD07FM1.SCF screened BAC_end (961 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig975 1622 0.0 >3x_Contig975 Length = 5628 Score = 1622 bits (818), Expect = 0.0 Identities = 857/866 (98%), Gaps = 3/866 (0%) Strand = Plus / Minus Query: 92 taatgaaaaatggcatcaactgtccgtgtcttagcttgcatttttatttagcacttgctt 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3970 taatgaaaaatggcatcaactgtccgtgtcttagcttgcatttttatttagcacttgctt 3911 Query: 152 ccaataaacgccattacactgggaaagtttggcttcggggctcaaagtatgaaacacgct 211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3910 ccaataaacgccattacactgggaaagtttggcttcggggctcaaagtatgaaacacgct 3851 Query: 212 atattatctctagttccttctcattcattgcgtgcaaggaattcaccacagggaaagata 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3850 atattatctctagttccttctcattcattgcgtgcaaggaattcaccacagggaaagata 3791 Query: 272 aatttcccggaaattgttatctattaggagatcattgtaattatatagcacggacattag 331 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3790 aatt-cccggaaattgttatctattaggagatcattgtaattatatagcacggacattag 3732 Query: 332 aagtatcgaggtatggatatcagaaaattgcagggtgagttgaaagacgatagtatttac 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3731 aagtatcgaggtatggatatcagaaaattgcagggtgagttgaaagacgatagtatttac 3672 Query: 392 acgtttgccgcgtggtgaaatctgcacgtttaccttaactccatactgaacccgttcatg 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3671 acgtttgccgcgtggtgaaatctgcacgtttaccttaactccatactgaacccgttcatg 3612 Query: 452 aatagaaaaaaaaaaagtactgataggaacttgaaagctctgtcctttattgattcgtta 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3611 aatagaaaaaaaaaaagtactgataggaacttgaaagctctgtcctttattgattcgtta 3552 Query: 512 aagttctaatcttcccgacattcataaattcaggaattcagctgtcaagaacattatatt 571 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3551 aagttctaatcttcccgacattcataaattcaggaattcagctgtcaagaacattatatt 3492 Query: 572 tcagccgaagagtatgtattgcaatgaattgaattaattgtaaagtgcataacataatgg 631 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3491 tcagccgaagagtatgtattgcaatgaattgaattaattgtaaagtgcataacataatgg 3432 Query: 632 tcctttcaccttcaacatgggaaatatatagagcggaaagaacaagacacttccaatgca 691 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3431 tcctttcaccttcaacatgggaaatatatagagcggaaagaacaagacacttccaatgca 3372 Query: 692 tgcgttaatagagtacttactgcatgtttttctcgttcgttacgtcttttgccgcggttt 751 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3371 tgcgttaatagagtacttactgcatgtttttctcgttcgttacgtcttttgccgcggttt 3312 Query: 752 cgcatatatgctacgtagatttcttttaaacctcgcgagtcaatttccatt-aaatgatg 810 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 3311 cgcatatatgctacgtagatttcttttaaacctcgcgagtcaatttccattaaaatgatg 3252 Query: 811 agacggtactgacagcagaatgtcactagactaatcagtgatcgcatgctgtgtttaaat 870 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3251 agacggtactgacagcagaatgtcactagactaatcagtgatcgcatgctgtgtttaaat 3192 Query: 871 ccgtgaatttgataagtattggcggaataacaagttgaggaagtggtaaagtttactttg 930 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | | Sbjct: 3191 ccgtgaatttgataagtattggcggaataacaagttgaggaagtggtagagtttac-tcg 3133 Query: 931 gcctctctcttttttgccatttgcat 956 ||||||||| || ||||| |||||| Sbjct: 3132 ccctctctctcttctgccacttgcat 3107 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,590 Number of Sequences: 1807 Number of extensions: 11590 Number of successful extensions: 60 Number of sequences better than 1.0e-20: 1 length of query: 961 length of database: 10,358,551 effective HSP length: 16 effective length of query: 945 effective length of database: 10,329,639 effective search space: 9761508855 effective search space used: 9761508855 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)