BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC18ZD08FM1.SCF screened BAC_end
         (978 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1210                                                        1657   0.0  

>3x_Contig1210 
          Length = 6392

 Score = 1657 bits (836), Expect = 0.0
 Identities = 880/891 (98%), Gaps = 3/891 (0%)
 Strand = Plus / Minus

                                                                        
Query: 90   gtgaataaattgtgagacaaagaaaaaaaagtaagaagagaaaaagttgtaaaacccttc 149
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5459 gtgaataaattgtgagacaaagaaaaaaaagtaagaagagaaaaagttgtaaaacccttc 5400

                                                                        
Query: 150  agtaatactaaaagagtcatcaaagaaaccgtgtcctaccacgtcaatagtttcggttaa 209
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5399 agtaatactaaaagagtcatcaaagaaaccgtgtcctaccacgtcaatagtttcggttaa 5340

                                                                        
Query: 210  catctttaattaaaatgggaggttggtcataacaaatatcattatatcttggtagatttt 269
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5339 catctttaattaaaatgggaggttggtcataacaaatatcattatatcttggtagatttt 5280

                                                                        
Query: 270  cgatggaactttatcattcttctcgaacggaaggaactaaagagagtagtgtctgggcat 329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5279 cgatggaactttatcattcttctcgaacggaaggaactaaagagagtagtgtctgggcat 5220

                                                                        
Query: 330  gtttcaatgatatcgtatctctcagctaattacacttattgctttggttcaccaccttgt 389
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5219 gtttcaatgatatcgtatctctcagctaattacacttattgctttggttcaccaccttgt 5160

                                                                        
Query: 390  tggttagaagcgtcgttcttgtacatttgttcgaacaacttcatggaagcggtttgtaat 449
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5159 tggttagaagcgtcgttcttgtacatttgttcgaacaacttcatggaagcggtttgtaat 5100

                                                                        
Query: 450  tcttcagtcttggtcttcaactcttcagcgtcgacttcttcaccggcttgaactctagcg 509
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5099 tcttcagtcttggtcttcaactcttcagcgtcgacttcttcaccggcttgaactctagcg 5040

                                                                        
Query: 510  accaattctctcaaagcagcgacttggtccttaaccttttgagcttcagccttgtccaat 569
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5039 accaattctctcaaagcagcgacttggtccttaaccttttgagcttcagccttgtccaat 4980

                                                                        
Query: 570  ttttcttcgaattccttcaaagaagcttcggtatcgttggccaattggtcacccttgttg 629
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4979 ttttcttcgaattccttcaaagaagcttcggtatcgttggccaattggtcacccttgttg 4920

                                                                        
Query: 630  gcggtttcaatagccttctttctggtttcatcttgttctctgaacttttcagcatcgcta 689
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4919 gcggtttcaatagccttctttctggtttcatcttgttctctgaacttttcagcatcgcta 4860

                                                                        
Query: 690  accatttgctcgatttcagattcggacaaaccggaagaaccagcaacagtgatggaagca 749
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4859 accatttgctcgatttcagattcggacaaaccggaagaaccagcaacagtgatggaagca 4800

                                                                        
Query: 750  tccttgttggaagccttgtctctagcagagacgttgatgataccatcggcatcaatatcg 809
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4799 tccttgttggaagccttgtctctagcagagacgttgatgataccatcggcatcaatatcg 4740

                                                                        
Query: 810  aaagaaacttcgatttgtgggacacctttttggagctggtgggataccagacnaagtgaa 869
            ||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||
Sbjct: 4739 aaagaaacttcgatttgtgggacacc-ctttggagctggtgggataccagacaaagtgaa 4681

                                                                        
Query: 870  gttaccgatcaacttgttgtctctgaccaa-tctctttcaccttggaaactcctgattt- 927
            |||||||||||||||||||||||||||||| ||||||||||||||||||   ||||||| 
Sbjct: 4680 gttaccgatcaacttgttgtctctgaccaattctctttcaccttggaaaactctgatttc 4621

                                                               
Query: 928  cacggaggtttgaccagcagcagcagtggaaaaaaattgagacttcttggt 978
            |||||||||||||||||||||||||||||| || | |||||||||||||||
Sbjct: 4620 cacggaggtttgaccagcagcagcagtggagaagatttgagacttcttggt 4570


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8771
Number of Sequences: 1807
Number of extensions: 8771
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 978
length of database: 10,358,551
effective HSP length: 16
effective length of query: 962
effective length of database: 10,329,639
effective search space: 9937112718
effective search space used: 9937112718
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)