BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC18ZD08FM1.SCF screened BAC_end (978 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1210 1657 0.0 >3x_Contig1210 Length = 6392 Score = 1657 bits (836), Expect = 0.0 Identities = 880/891 (98%), Gaps = 3/891 (0%) Strand = Plus / Minus Query: 90 gtgaataaattgtgagacaaagaaaaaaaagtaagaagagaaaaagttgtaaaacccttc 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5459 gtgaataaattgtgagacaaagaaaaaaaagtaagaagagaaaaagttgtaaaacccttc 5400 Query: 150 agtaatactaaaagagtcatcaaagaaaccgtgtcctaccacgtcaatagtttcggttaa 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5399 agtaatactaaaagagtcatcaaagaaaccgtgtcctaccacgtcaatagtttcggttaa 5340 Query: 210 catctttaattaaaatgggaggttggtcataacaaatatcattatatcttggtagatttt 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5339 catctttaattaaaatgggaggttggtcataacaaatatcattatatcttggtagatttt 5280 Query: 270 cgatggaactttatcattcttctcgaacggaaggaactaaagagagtagtgtctgggcat 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5279 cgatggaactttatcattcttctcgaacggaaggaactaaagagagtagtgtctgggcat 5220 Query: 330 gtttcaatgatatcgtatctctcagctaattacacttattgctttggttcaccaccttgt 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5219 gtttcaatgatatcgtatctctcagctaattacacttattgctttggttcaccaccttgt 5160 Query: 390 tggttagaagcgtcgttcttgtacatttgttcgaacaacttcatggaagcggtttgtaat 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5159 tggttagaagcgtcgttcttgtacatttgttcgaacaacttcatggaagcggtttgtaat 5100 Query: 450 tcttcagtcttggtcttcaactcttcagcgtcgacttcttcaccggcttgaactctagcg 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5099 tcttcagtcttggtcttcaactcttcagcgtcgacttcttcaccggcttgaactctagcg 5040 Query: 510 accaattctctcaaagcagcgacttggtccttaaccttttgagcttcagccttgtccaat 569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5039 accaattctctcaaagcagcgacttggtccttaaccttttgagcttcagccttgtccaat 4980 Query: 570 ttttcttcgaattccttcaaagaagcttcggtatcgttggccaattggtcacccttgttg 629 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4979 ttttcttcgaattccttcaaagaagcttcggtatcgttggccaattggtcacccttgttg 4920 Query: 630 gcggtttcaatagccttctttctggtttcatcttgttctctgaacttttcagcatcgcta 689 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4919 gcggtttcaatagccttctttctggtttcatcttgttctctgaacttttcagcatcgcta 4860 Query: 690 accatttgctcgatttcagattcggacaaaccggaagaaccagcaacagtgatggaagca 749 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4859 accatttgctcgatttcagattcggacaaaccggaagaaccagcaacagtgatggaagca 4800 Query: 750 tccttgttggaagccttgtctctagcagagacgttgatgataccatcggcatcaatatcg 809 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4799 tccttgttggaagccttgtctctagcagagacgttgatgataccatcggcatcaatatcg 4740 Query: 810 aaagaaacttcgatttgtgggacacctttttggagctggtgggataccagacnaagtgaa 869 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 4739 aaagaaacttcgatttgtgggacacc-ctttggagctggtgggataccagacaaagtgaa 4681 Query: 870 gttaccgatcaacttgttgtctctgaccaa-tctctttcaccttggaaactcctgattt- 927 |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| Sbjct: 4680 gttaccgatcaacttgttgtctctgaccaattctctttcaccttggaaaactctgatttc 4621 Query: 928 cacggaggtttgaccagcagcagcagtggaaaaaaattgagacttcttggt 978 |||||||||||||||||||||||||||||| || | ||||||||||||||| Sbjct: 4620 cacggaggtttgaccagcagcagcagtggagaagatttgagacttcttggt 4570 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8771 Number of Sequences: 1807 Number of extensions: 8771 Number of successful extensions: 63 Number of sequences better than 1.0e-20: 1 length of query: 978 length of database: 10,358,551 effective HSP length: 16 effective length of query: 962 effective length of database: 10,329,639 effective search space: 9937112718 effective search space used: 9937112718 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)