BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC18ZE06FM1.SCF screened BAC_end (971 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1219 1534 0.0 >3x_Contig1219 Length = 5018 Score = 1534 bits (774), Expect = 0.0 Identities = 818/828 (98%), Gaps = 4/828 (0%) Strand = Plus / Plus Query: 88 caacggatgaattagaattagaagcgcttgtgcttgcagtagcagtagcggcagcggcag 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3230 caacggatgaattagaattagaagcgcttgtgcttgcagtagcagtagcggcagcggcag 3289 Query: 148 cagaggctccagaagcactagaagcataacccctacgttgttccatagccttacccataa 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3290 cagaggctccagaagcactagaagcataacccctacgttgttccatagccttacccataa 3349 Query: 208 atggacattgttgagcgatagctggtaagttcgcattcttcaaagccttgacactctgca 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3350 atggacattgttgagcgatagctggtaagttcgcattcttcaaagccttgacactctgca 3409 Query: 268 ttgatccagtggcagagtgcataaatggacagatcttggcagaagaacgaataacagatt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3410 ttgatccagtggcagagtgcataaatggacagatcttggcagaagaacgaataacagatt 3469 Query: 328 ccatgttttttcaatccaaaatgaagacggttaagtgtgtgcaagggaaaccaataaaag 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3470 ccatgttttttcaatccaaaatgaagacggttaagtgtgtgcaagggaaaccaataaaag 3529 Query: 388 aagctttctcactcgcaaagatatagccacttctaacaggtagaatctttttaaattttt 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3530 aagctttctcactcgcaaagatatagccacttctaacaggtagaatctttttaaattttt 3589 Query: 448 ctcttcagtgacgaaagtgaaacctggtgtatcaaagaatattttactctagattagaga 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3590 ctcttcagtgacgaaagtgaaacctggtgtatcaaagaatattttactctagattagaga 3649 Query: 508 agcactgaaccaaaaccaaaggtgtatcttaagttaaacctgaagctcatctcttattat 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3650 agcactgaaccaaaaccaaaggtgtatcttaagttaaacctgaagctcatctcttattat 3709 Query: 568 ataattatgaaaacatatcatattatatctttttttgagttttcagtcattttttcctca 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3710 ataattatgaaaacatatcatattatatctttttttgagttttcagtcattttttcctca 3769 Query: 628 gtcattttcattttcaggcaatatgagaggattttacctttgaaatgattccgacattgc 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3770 gtcattttcattttcaggcaatatgagaggattttacctttgaaatgattccgacattgc 3829 Query: 688 cagttccgcagaagatattgtaggaagacagggaagggaaaagggaaaaaaagaaatgct 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3830 cagttccgcagaagatattgtaggaagacagggaagggaaaagggaaaaaaagaaatgct 3889 Query: 748 ggacttaggagcttttctttttggaggttttcagccaataagagtagaagatgatgtgag 807 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 3890 ggacttaggagcttttctttttggaggttttcagccaataagagtagaggatgatgtgag 3949 Query: 808 cgaa-gcgaag-agctgtggcagtaat-gctggcccctggccctggnacctgcagttgaa 864 |||| |||||| ||||||||||||||| ||||| |||||||||||| | ||||||||| Sbjct: 3950 cgaacgcgaagtagctgtggcagtaatggctgg-ccctggccctggacctggcagttgaa 4008 Query: 865 gctggggattggcctggatgagcatggntcgcttagcgggagcaagtc 912 ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4009 gctggggattggcctggatgagcatggttcgcttagcgggagcaagtc 4056 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,226 Number of Sequences: 1807 Number of extensions: 13226 Number of successful extensions: 1533 Number of sequences better than 1.0e-20: 1 length of query: 971 length of database: 10,358,551 effective HSP length: 16 effective length of query: 955 effective length of database: 10,329,639 effective search space: 9864805245 effective search space used: 9864805245 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)