BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC18ZE09FM1.SCF screened BAC_end (974 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1219 1570 0.0 >3x_Contig1219 Length = 5018 Score = 1570 bits (792), Expect = 0.0 Identities = 821/827 (99%), Gaps = 3/827 (0%) Strand = Plus / Plus Query: 87 caacggatgaattagaattagaagcgcttgtgcttgcagtagcagtagcggcagcggcag 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3230 caacggatgaattagaattagaagcgcttgtgcttgcagtagcagtagcggcagcggcag 3289 Query: 147 cagaggctccagaagcactagaagcataacccctacgttgttccatagccttacccataa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3290 cagaggctccagaagcactagaagcataacccctacgttgttccatagccttacccataa 3349 Query: 207 atggacattgttgatctatagctggtaagttcgcattcttcaaagccttgacactctgca 266 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3350 atggacattgttgagcgatagctggtaagttcgcattcttcaaagccttgacactctgca 3409 Query: 267 ttgatccagtggcagagtgcataaatggacagatcttggcagaagaacgaataacagatt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3410 ttgatccagtggcagagtgcataaatggacagatcttggcagaagaacgaataacagatt 3469 Query: 327 ccatgttttttcaatccaaaatgaagacggttaagtgtgtgcaagggaaaccaataaaag 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3470 ccatgttttttcaatccaaaatgaagacggttaagtgtgtgcaagggaaaccaataaaag 3529 Query: 387 aagctttctcactcgcaaagatatagccacttctaacaggtagaatctttttaaattttt 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3530 aagctttctcactcgcaaagatatagccacttctaacaggtagaatctttttaaattttt 3589 Query: 447 ctcttcagtgacgaaagtgaaacctggtgtatcaaagaatattttactctagattagaga 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3590 ctcttcagtgacgaaagtgaaacctggtgtatcaaagaatattttactctagattagaga 3649 Query: 507 agcactgaaccaaaaccaaaggtgtatcttaagttaaacctgaagctcatctcttattat 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3650 agcactgaaccaaaaccaaaggtgtatcttaagttaaacctgaagctcatctcttattat 3709 Query: 567 ataattatgaaaacatatcatattatatctttttttgagttttcagtcattttttcctca 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3710 ataattatgaaaacatatcatattatatctttttttgagttttcagtcattttttcctca 3769 Query: 627 gtcattttcattttcaggcaatatgagaggattttacctttgaaatgattccgacattgc 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3770 gtcattttcattttcaggcaatatgagaggattttacctttgaaatgattccgacattgc 3829 Query: 687 cagttccgcagaagatattgtaggaagacagggaagggaaaagggaaaaaaagaaatgct 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3830 cagttccgcagaagatattgtaggaagacagggaagggaaaagggaaaaaaagaaatgct 3889 Query: 747 ggacttaggagctnttctttttggaggttttcagccaataagagtagaggatgatgtgag 806 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3890 ggacttaggagcttttctttttggaggttttcagccaataagagtagaggatgatgtgag 3949 Query: 807 cgaa-gcgaag-agctgtggcagtaat-gctggccctggccctggacctggcagttgaag 863 |||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 3950 cgaacgcgaagtagctgtggcagtaatggctggccctggccctggacctggcagttgaag 4009 Query: 864 ctggggattggcctggatgagcatggttcgcttagcgggagcaagtc 910 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4010 ctggggattggcctggatgagcatggttcgcttagcgggagcaagtc 4056 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 18,285 Number of Sequences: 1807 Number of extensions: 18285 Number of successful extensions: 2714 Number of sequences better than 1.0e-20: 1 length of query: 974 length of database: 10,358,551 effective HSP length: 16 effective length of query: 958 effective length of database: 10,329,639 effective search space: 9895794162 effective search space used: 9895794162 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)