BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC18ZE09RM1.SCF screened BAC_end (950 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig694 1342 0.0 >3x_Contig694 Length = 2435 Score = 1342 bits (677), Expect = 0.0 Identities = 689/693 (99%) Strand = Plus / Plus Query: 45 gctttattaatcttggccataatttggccgagttggtattttttaatcgccaaattaatg 104 |||||||||||||||||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 1740 gctttattaatcttggccataagtagtccgagttggtatttttttatcgccaaattaatg 1799 Query: 105 agttggtaatcaaatttgccggaagacgtcatagagtttctaacagactccatgaagctc 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1800 agttggtaatcaaatttgccggaagacgtcatagagtttctaacagactccatgaagctc 1859 Query: 165 gtataatctaaatttttgaaaaagtagtcatggtattgttcaattttagctgtgaaccct 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1860 gtataatctaaatttttgaaaaagtagtcatggtattgttcaattttagctgtgaaccct 1919 Query: 225 aatggcaaagtttcttgaaatattgaattacaaaggcctaaccaaagctttcttctgtaa 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1920 aatggcaaagtttcttgaaatattgaattacaaaggcctaaccaaagctttcttctgtaa 1979 Query: 285 ttgattaccctctgaggaattagtgacggattgaacattaacttataatcagtaggatcc 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1980 ttgattaccctctgaggaattagtgacggattgaacattaacttataatcagtaggatcc 2039 Query: 345 ttatgcaatcccaaaactaaagctgtttgaagcaattgaccagaatgtaataaaagatgc 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2040 ttatgcaatcccaaaactaaagctgtttgaagcaattgaccagaatgtaataaaagatgc 2099 Query: 405 tgatcaagtaacaagttgctttctcttggagaaaaggaacagcaaattctttgataaagc 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2100 tgatcaagtaacaagttgctttctcttggagaaaaggaacagcaaattctttgataaagc 2159 Query: 465 atacagcaaaatatgtcttcggaataaaatcggtccacatttaataaagtaagaattctc 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2160 atacagcaaaatatgtcttcggaataaaatcggtccacatttaataaagtaagaattctc 2219 Query: 525 tgggacaaagacaaccacttatcataagtaaaatctaatttatgcaaacctagggcaatg 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2220 tgggacaaagacaaccacttatcataagtaaaatctaatttatgcaaacctagggcaatg 2279 Query: 585 caatccattttgacatcttcgtttaatgacactgtaagaaaatcatgcgaaatttgtaga 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2280 caatccattttgacatcttcgtttaatgacactgtaagaaaatcatgcgaaatttgtaga 2339 Query: 645 ataaccataaaaattgccaagttttccaaatcgttacgtaagttatccttactcaagttc 704 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2340 ataaccataaaaattgccaagttttccaaatcgttacgtaagttatccttactcaagttc 2399 Query: 705 caacgagcttttccagtaggagcaccggtggca 737 ||||||||||||||||||||||||||||||||| Sbjct: 2400 caacgagcttttccagtaggagcaccggtggca 2432 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7254 Number of Sequences: 1807 Number of extensions: 7254 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 950 length of database: 10,358,551 effective HSP length: 16 effective length of query: 934 effective length of database: 10,329,639 effective search space: 9647882826 effective search space used: 9647882826 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)