BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC18ZG03FM1.SCF screened BAC_end (975 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig776 1620 0.0 >3x_Contig776 Length = 3521 Score = 1620 bits (817), Expect = 0.0 Identities = 868/879 (98%), Gaps = 5/879 (0%) Strand = Plus / Plus Query: 87 gcaatgttcccgtttaaatcgttttgaacaacgacaaaagcagcatttcccaaaagatcg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2594 gcaatgttcccgtttaaatcgttttgaacaacgacaaaagcagcatttcccaaaagatcg 2653 Query: 147 aacaatttgacaagggattctgatgcttccaaaaactcggacgttgaaatcttgttatcc 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2654 aacaatttgacaagggattctgatgcttccaaaaactcggacgttgaaatcttgttatcc 2713 Query: 207 cgatccacaggaactgtctcgaaagacatcttcatttcatcgaaaaaggttgacatggcg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2714 cgatccacaggaactgtctcgaaagacatcttcatttcatcgaaaaaggttgacatggcg 2773 Query: 267 ttctaaatttatatctggaaaagtgtcaagagcaaatgaaaggcacttcaaaccacaaaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2774 ttctaaatttatatctggaaaagtgtcaagagcaaatgaaaggcacttcaaaccacaaaa 2833 Query: 327 tgatcaacaaatactatgcagttaatgttgcttagttgcttttatccgatgtattactaa 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2834 tgatcaacaaatactatgcagttaatgttgcttagttgcttttatccgatgtattactaa 2893 Query: 387 atgatgcacttttcagtgatgtggatacttgctcaatagttacttcaatattgatttgta 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2894 atgatgcacttttcagtgatgtggatacttgctcaatagttacttcaatattgatttgta 2953 Query: 447 gtgtggcttatcacatgatggatgaattggaaataatatttcacgttgaatttccatatg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2954 gtgtggcttatcacatgatggatgaattggaaataatatttcacgttgaatttccatatg 3013 Query: 507 tttacactggcaaagaaaattcgaaatttttcagatttcaaaacatcaacacgacaagac 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3014 tttacactggcaaagaaaattcgaaatttttcagatttcaaaacatcaacacgacaagac 3073 Query: 567 aagaatgaacgaacacgacatactacaattaaatgttgtcttaaggaggatccattctga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3074 aagaatgaacgaacacgacatactacaattaaatgttgtcttaaggaggatccattctga 3133 Query: 627 gaataggaaatgaaccacttttctaggagtatatctttagttggatatgtttatgtttat 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3134 gaataggaaatgaaccacttttctaggagtatatctttagttggatatgtttatgtttat 3193 Query: 687 gaaaggtgttaattaatatatatttgtcatctgaatgagatatgcaagatattaacctct 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3194 gaaaggtgttaattaatatatatttgtcatctgaatgagatatgcaagatattaacctct 3253 Query: 747 tccagcattcattctcttcagtctcaactttttagccatagacattggtttattggatac 806 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3254 tccagcattcattctcttcagtctcaacttttcagccatagacattggtttattggatac 3313 Query: 807 cgnagcagtttgtgctggtgctggtgctggggttggagta-aaagaacaggnctagatct 865 || ||||||||||||||||||||||||||||||||||||| || ||||||| |||||||| Sbjct: 3314 cggagcagtttgtgctggtgctggtgctggggttggagtagaaggaacagggctagatct 3373 Query: 866 aga-ctaccgttcttcttttc-agaagttcttcgatttctctttgctttctagcaa-ttc 922 ||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||| Sbjct: 3374 agagctaccgttcttcttttcaagaagttcttcgatttctctttgctttccagcaatttc 3433 Query: 923 gtctc-ttccttgttgattctttcacgttccgcacgtct 960 ||||| |||||||||||||||||||||||| |||||||| Sbjct: 3434 gtctctttccttgttgattctttcacgttcggcacgtct 3472 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7984 Number of Sequences: 1807 Number of extensions: 7984 Number of successful extensions: 70 Number of sequences better than 1.0e-20: 1 length of query: 975 length of database: 10,358,551 effective HSP length: 16 effective length of query: 959 effective length of database: 10,329,639 effective search space: 9906123801 effective search space used: 9906123801 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)