BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC18ZG07RM1.SCF screened BAC_end (927 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1047 1227 0.0 >3x_Contig1047 Length = 4185 Score = 1227 bits (619), Expect = 0.0 Identities = 642/650 (98%) Strand = Plus / Minus Query: 49 gaaattgttattgttccattctcgttttctcgatgagatgagctttgtgaaatttttcag 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 757 gaaattgttattgttccattctcgttttctcgatgagatgagctttgtgaaatttttcag 698 Query: 109 tgaaaaaaaaaaaaaaaattttttttggtgatgaaaggattagttaattatcgtttagag 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 697 tgaaaaaaaaaaaaaaaattttttttggtgatgaaaggattagttaattatcgtttagag 638 Query: 169 tgatgtgatatgaatatataaagaaagccggcttgagatcttgttttctcttctttggat 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 tgatgtgatatgaatatataaagaaagccggcttgagatcttgttttctcttctttggat 578 Query: 229 atcacttttcggggaatcatttttccggaacttgggcggttaaatcatgtcgaagaagca 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 577 atcacttttcggggaatcatttttccggaacttgggcggttaaatcatgtcgaagaagca 518 Query: 289 agggtagatttgggcgggaaagtgccactatggtgggaatttccctggagttatgtcatt 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 517 agggtagatttgggcgggaaagtgccactatggtgggaatttccctggagttatgtcatt 458 Query: 349 gtggttgattcaggggtgtctctccggtgtgggctcgcgttgcccattttncaatgggca 408 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 457 gtggttgattcaggggtgtctctccggtgtgggctcgcgttgcccatttttcaatgggca 398 Query: 409 acgcgatataagtgcttgagtttgttcctccctttttgaggtgcatcattcatatggaat 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 acgcgatataagtgcttgagtttgttcctccctttttgaggtgcatcattcatatggaat 338 Query: 469 tgctcaccaagtgtgtaaacgtttggttactgatacgatgaaaggggcccgtactcgatt 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 337 tgctcaccaagtgtgtaaacgtttggttactgatacgatgaaaggggcccgtactcgatt 278 Query: 529 agtacgggatatgctctctattgtcgactttttgaaatcgccagcatttgaaatattcac 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 agtacgggatatgctctctattgtcgactttttgaaatcgccagcatttgaaatattcac 218 Query: 589 ggaattcatactgtactgtatttttttctgctgaaattgaaactgctgctttattaactg 648 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 217 ggaattcatactgtactgtatttttttctgttgaaattgaaactgctgttttatcaactg 158 Query: 649 gaaaccttctcattttaccaccgtttgaccgttcattattcaaccttatt 698 ||||||| |||| || ||||||||||||||||||||||| |||||||||| Sbjct: 157 gaaacctcctcaattgaccaccgtttgaccgttcattatccaaccttatt 108 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 25,560 Number of Sequences: 1807 Number of extensions: 25560 Number of successful extensions: 2709 Number of sequences better than 1.0e-20: 1 length of query: 927 length of database: 10,358,551 effective HSP length: 16 effective length of query: 911 effective length of database: 10,329,639 effective search space: 9410301129 effective search space used: 9410301129 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)