BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC18ZG10RM1.SCF screened BAC_end (906 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1454 1631 0.0 >3x_Contig1454 Length = 9243 Score = 1631 bits (823), Expect = 0.0 Identities = 834/838 (99%) Strand = Plus / Minus Query: 51 ccttcttaaattatgaattaaataaagaaaaaagctgaaataaaatgccagattataatc 110 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 3595 ccttcttaaattatgaaggaaataaagaaaaaagctgaaataaaatgccagattataatc 3536 Query: 111 aagagacgcgaaagcaataataggaacagggaaagctgtactcaactgagaagcattgac 170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3535 aagagacgcgaaagcaataataggaacagggaaagctgtactcaactgagaagcattgac 3476 Query: 171 tctctgaaaatatggctgttgatttaagacctgaaacatggactgtatcttctaatgaag 230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3475 tctctgaaaatatggctgttgatttaagacctgaaacatggactgtatcttctaatgaag 3416 Query: 231 cccttaatctctccttagttgatgaaaatggggcagttaacttcaagccaaccttcacgt 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3415 cccttaatctctccttagttgatgaaaatggggcagttaacttcaagccaaccttcacgt 3356 Query: 291 atcctatttatggtgattctgaacaaatatttgggtataaaaacttacagatcttcttag 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3355 atcctatttatggtgattctgaacaaatatttgggtataaaaacttacagatcttcttag 3296 Query: 351 cgttcgattctatcacgttcaaaccatttgttaatgtcaaatatgatgcgaaactcaata 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3295 cgttcgattctatcacgttcaaaccatttgttaatgtcaaatatgatgcgaaactcaata 3236 Query: 411 acgaaattgaagatgtacagaagctacttcttgataagcttccagaagacgatgtaatta 470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3235 acgaaattgaagatgtacagaagctacttcttgataagcttccagaagacgatgtaatta 3176 Query: 471 ttaaagatgaggaagcatggataaaaacgttcaccaaggagcaagagacttttgctttac 530 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3175 ttaaagatgaggaagcatggataaaaacgttcaccaaggagcaagagacttttgctttac 3116 Query: 531 ctgaaaaagacaaactagttgaggaatatgaaatcggtgatcaagaatttgtcatatata 590 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3115 ctgaaaaagacaaactagttgaggaatatgaaatcggtgatcaagaatttgtcatatata 3056 Query: 591 gagtttctttgcaggacccagctatcaaaatgttgcataaaagaatgcagattttcacgt 650 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3055 gagtttctttgcaggacccagctatcaaaatgttgcataaaagaatgcagattttcacgt 2996 Query: 651 tattgttcatagagtcggcctcatacattgacgaaaatgattcatcttgggaaatattca 710 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2995 tattgttcatagagtcggcctcatacattgacgaaaatgattcatcttgggaaatattca 2936 Query: 711 ttgtattcaataaaaactctaagaagtgtattgggtacaccaccacttatcagttctgga 770 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2935 ttgtattcaataaaaactctaagaagtgtattgggtacaccaccacttatcagttctgga 2876 Query: 771 aatatntaggtgctcaatcgtttgattccagcaaagcagatgaacagaaatgcagggcaa 830 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2875 aatatttaggtgctcaatcgtttgattccagcaaagcagatgaacagaaatgcagggcaa 2816 Query: 831 aaatatcccaatttttaatcatgccttcataccaaggtcatggtcatggaaaaaggct 888 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2815 aaatatcccaatttttaatcatgcctccataccaaggtcatggtcatggaaaaaggct 2758 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7502 Number of Sequences: 1807 Number of extensions: 7502 Number of successful extensions: 59 Number of sequences better than 1.0e-20: 1 length of query: 906 length of database: 10,358,551 effective HSP length: 16 effective length of query: 890 effective length of database: 10,329,639 effective search space: 9193378710 effective search space used: 9193378710 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)