BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC18ZG10RM1.SCF screened BAC_end
         (906 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1454                                                        1631   0.0  

>3x_Contig1454 
          Length = 9243

 Score = 1631 bits (823), Expect = 0.0
 Identities = 834/838 (99%)
 Strand = Plus / Minus

                                                                        
Query: 51   ccttcttaaattatgaattaaataaagaaaaaagctgaaataaaatgccagattataatc 110
            |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 3595 ccttcttaaattatgaaggaaataaagaaaaaagctgaaataaaatgccagattataatc 3536

                                                                        
Query: 111  aagagacgcgaaagcaataataggaacagggaaagctgtactcaactgagaagcattgac 170
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3535 aagagacgcgaaagcaataataggaacagggaaagctgtactcaactgagaagcattgac 3476

                                                                        
Query: 171  tctctgaaaatatggctgttgatttaagacctgaaacatggactgtatcttctaatgaag 230
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3475 tctctgaaaatatggctgttgatttaagacctgaaacatggactgtatcttctaatgaag 3416

                                                                        
Query: 231  cccttaatctctccttagttgatgaaaatggggcagttaacttcaagccaaccttcacgt 290
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3415 cccttaatctctccttagttgatgaaaatggggcagttaacttcaagccaaccttcacgt 3356

                                                                        
Query: 291  atcctatttatggtgattctgaacaaatatttgggtataaaaacttacagatcttcttag 350
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3355 atcctatttatggtgattctgaacaaatatttgggtataaaaacttacagatcttcttag 3296

                                                                        
Query: 351  cgttcgattctatcacgttcaaaccatttgttaatgtcaaatatgatgcgaaactcaata 410
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3295 cgttcgattctatcacgttcaaaccatttgttaatgtcaaatatgatgcgaaactcaata 3236

                                                                        
Query: 411  acgaaattgaagatgtacagaagctacttcttgataagcttccagaagacgatgtaatta 470
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3235 acgaaattgaagatgtacagaagctacttcttgataagcttccagaagacgatgtaatta 3176

                                                                        
Query: 471  ttaaagatgaggaagcatggataaaaacgttcaccaaggagcaagagacttttgctttac 530
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3175 ttaaagatgaggaagcatggataaaaacgttcaccaaggagcaagagacttttgctttac 3116

                                                                        
Query: 531  ctgaaaaagacaaactagttgaggaatatgaaatcggtgatcaagaatttgtcatatata 590
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3115 ctgaaaaagacaaactagttgaggaatatgaaatcggtgatcaagaatttgtcatatata 3056

                                                                        
Query: 591  gagtttctttgcaggacccagctatcaaaatgttgcataaaagaatgcagattttcacgt 650
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3055 gagtttctttgcaggacccagctatcaaaatgttgcataaaagaatgcagattttcacgt 2996

                                                                        
Query: 651  tattgttcatagagtcggcctcatacattgacgaaaatgattcatcttgggaaatattca 710
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2995 tattgttcatagagtcggcctcatacattgacgaaaatgattcatcttgggaaatattca 2936

                                                                        
Query: 711  ttgtattcaataaaaactctaagaagtgtattgggtacaccaccacttatcagttctgga 770
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2935 ttgtattcaataaaaactctaagaagtgtattgggtacaccaccacttatcagttctgga 2876

                                                                        
Query: 771  aatatntaggtgctcaatcgtttgattccagcaaagcagatgaacagaaatgcagggcaa 830
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2875 aatatttaggtgctcaatcgtttgattccagcaaagcagatgaacagaaatgcagggcaa 2816

                                                                      
Query: 831  aaatatcccaatttttaatcatgccttcataccaaggtcatggtcatggaaaaaggct 888
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2815 aaatatcccaatttttaatcatgcctccataccaaggtcatggtcatggaaaaaggct 2758


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7502
Number of Sequences: 1807
Number of extensions: 7502
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)