BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC18ZH07RM1.SCF screened BAC_end (915 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1770 1566 0.0 >3x_Contig1770 Length = 29267 Score = 1566 bits (790), Expect = 0.0 Identities = 850/866 (98%), Gaps = 3/866 (0%) Strand = Plus / Plus Query: 49 aacagtgcgagcagagatttttaggtacaatgcgacaatcttttaggtgttagatcgact 108 |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 10016 aacagtgcgagcagagatctaaaggtacaatgcgacaatcttttaggtgttagatcgact 10075 Query: 109 aactcggccaattatttcagcaaatttacacactgagccatatacttaacagaaagtgag 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10076 aactcggccaattatttcagcaaatttacacactgagccatatacttaacagaaagtgag 10135 Query: 169 aatgtctttgataagtagggcaaatcgtcttggaggtttcacgaccgatgcaaagcattg 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10136 aatgtctttgataagtagggcaaatcgtcttggaggtttcacgaccgatgcaaagcattg 10195 Query: 229 ggaatacgaatggtccactactgctaaacaaaatgaaaatggtactgatgagaaggtaaa 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10196 ggaatacgaatggtccactactgctaaacaaaatgaaaatggtactgatgagaaggtaaa 10255 Query: 289 atataagttcaagcaatgggtaaaaaaagatcatcctttgagagatgtagttgaggatga 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10256 atataagttcaagcaatgggtaaaaaaagatcatcctttgagagatgtagttgaggatga 10315 Query: 349 tacagatgttcttaacttagatgaatttgataggacgaagatagctaagaaaaatgctcg 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10316 tacagatgttcttaacttagatgaatttgataggacgaagatagctaagaaaaatgctcg 10375 Query: 409 tgtccaggagaaaagtggcccagattcactctcaattaacgatataagaggagctgttgg 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10376 tgtccaggagaaaagtggcccagattcactctcaattaacgatataagaggagctgttgg 10435 Query: 469 tggttctgacattcctgggttctcaggatcggatgctaagaaagaagccgagagtgaagc 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10436 tggttctgacattcctgggttctcaggatcggatgctaagaaagaagccgagagtgaagc 10495 Query: 529 tgctgttgaaactcctgtggttgaaactccagcggaagaaactccggctgaagatacacc 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10496 tgctgttgaaactcctgtggttgaaactccagcggaagaaactccggctgaagatacacc 10555 Query: 589 ggcagaggtaaaagaccaagaaggcgacgtaaagatggaatgattcattatataacgatt 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10556 ggcagaggtaaaagaccaagaaggcgacgtaaagatggaatgattcattatataacgatt 10615 Query: 649 acacctatatactgtaattttactacgattcatggaatccagaatgtggcctggacgccc 708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10616 acacctatatactgtaattttactacgattcatggaatccagaatgtggcctggacgccc 10675 Query: 709 actctcgaataagataaagacagtcctttatccaaaggagggcaagcaggaaaaa-catc 767 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 10676 actctcgaataagataaagacagtccttcatccaaaggagggcaagcaggaaaaaccatc 10735 Query: 768 accgcttttgttctccacatatgacgtatgtgtgcgtttgagacattactatattaaact 827 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 10736 accgcttttgttctccacataggacgtatgtgtgcgtttgagacattactatataaaact 10795 Query: 828 attggctttcataattcacgttgttggtttttgaagtcat-aatgagaaggcattgcgag 886 |||||||||||| |||||||||||||||||| |||||| ||||||| ||||| ||||| Sbjct: 10796 attggctttcattattcacgttgttggttttgatagtcataaatgagatggcatcgcgag 10855 Query: 887 cggttttattcgaa-cctgtatttct 911 |||||||| ||||| ||||||||||| Sbjct: 10856 cggttttaatcgaagcctgtatttct 10881 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5898 Number of Sequences: 1807 Number of extensions: 5898 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 915 length of database: 10,358,551 effective HSP length: 16 effective length of query: 899 effective length of database: 10,329,639 effective search space: 9286345461 effective search space used: 9286345461 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)