BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC18ZH10FM1.SCF screened BAC_end (963 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig508 1677 0.0 >3x_Contig508 Length = 2437 Score = 1677 bits (846), Expect = 0.0 Identities = 869/876 (99%), Gaps = 1/876 (0%) Strand = Plus / Minus Query: 89 acgcaaagaatgtgagtgcaaccgtttcgtataaaaacaacttcgatgcgttggctactc 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2221 acgcaaagaatgtgagtgcaaccgtttcgtataaaaacaacttcgatgcgttggctactc 2162 Query: 149 tcctaagcaattacgaaaatttgatcaacgatacacatatgatttttattccaggtccaa 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2161 tcctaagcaattacgaaaatttgatcaacgatacacatatgatttttattccaggtccaa 2102 Query: 209 atgatccgtggacatcaatggttggactaggtactactactatgtggccccaaaaaataa 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2101 atgatccgtggacatcaatggttggactaggtactactactatgtggccccaaaaaataa 2042 Query: 269 ttccatcatcatttactcaaaaaatgagtagaatttgtagaaaagtgcattggggctcta 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2041 ttccatcatcatttactcaaaaaatgagtagaatttgtagaaaagtgcattggggctcta 1982 Query: 329 acccattaagaattgcatatctatcacaagagattgttctgacacgcgatgatttagcaa 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1981 acccattaagaattgcatatctatcacaagagattgttctgacacgcgatgatttagcaa 1922 Query: 389 atagatttaaaagatacaatattgttttccctactgtggaagaggagaaatatctggaaa 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1921 atagatttaaaagatacaatattgttttccctactgtggaagaggagaaatatctggaaa 1862 Query: 449 atgcagaacttcaagagcaatattcaagaaacccggatgtttcagtaggccagttaatcg 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1861 atgcagaacttcaagagcaatattcaagaaacccggatgtttcagtaggccagttaatcg 1802 Query: 509 cattcaagaataatttgcctgtaagtgttttagaatcgaggaaattggtgaaaacattgc 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1801 cattcaagaataatttgcctgtaagtgttttagaatcgaggaaattggtgaaaacattgc 1742 Query: 569 tcgatcaacaacatctatctccgttttcatcaagaattcgaccaactgtttgggatcttg 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1741 tcgatcaacaacatctatctccgttttcatcaagaattcgaccaactgtttgggatcttg 1682 Query: 629 atttcacattgcagctatcaccgcttccatcgagtatcatgctgtgtgacactagcgcac 688 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1681 atttcacattgcagctatcaccgcttccatcgagtatcatgctgtgtgacactagcgcac 1622 Query: 689 cagctttcgatgtaacgtacaacggatgcaaaacgatcaaccccggtagatttattcaca 748 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1621 cagctttcgatgtaacgtacaacggatgcaaaacgatcaaccccggtagatttattcaca 1562 Query: 749 aaagagctgccaaatatatagaattcttccctgcttnctaggttctagtagaggaagagc 808 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1561 aaagagctgccaaatatatagaattcttccctgcttctaaggttctagtagaggaagagc 1502 Query: 809 taccattttaatttatcaatattaaactacttgtggacctactttttgcggtcgntagca 868 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1501 taccattttaatttatcaatattaaactacttgtggacctactttttgcggtcgttagca 1442 Query: 869 ttcataatttattttagtttcttagacactaatctgagtacttgcgttggaaatattt-g 927 |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 1441 ttcataatttatttaagtttctaagacactaatctgagtacttgcgttggaaatatttcg 1382 Query: 928 tcaccgtatatggcatacagtatactggatcaatat 963 |||||||||||||||||||||||||||||||||||| Sbjct: 1381 tcaccgtatatggcatacagtatactggatcaatat 1346 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6704 Number of Sequences: 1807 Number of extensions: 6704 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 963 length of database: 10,358,551 effective HSP length: 16 effective length of query: 947 effective length of database: 10,329,639 effective search space: 9782168133 effective search space used: 9782168133 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)