BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC18ZH11FM1.SCF screened BAC_end (957 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1152 1653 0.0 >3x_Contig1152 Length = 5366 Score = 1653 bits (834), Expect = 0.0 Identities = 862/871 (98%), Gaps = 1/871 (0%) Strand = Plus / Minus Query: 88 cttagttcgttgaaacttattgtgtctgttgtcctttctgtcaatatctttaaaatttct 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4602 cttagttcgttgaaacttattgtgtctgttgtcctttctgtcaatatctttaaaatttct 4543 Query: 148 ctcgccaagtcttcaagcaattttctttgcacaaccgatttaccagtttgtacaaggttc 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4542 ctcgccaagtcttcaagcaattttctttgcacaaccgatttaccagtttgtacaaggttc 4483 Query: 208 atatcaattttaccagttttaggatccgtagcgtaatctttgatggcagactttatcagt 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4482 atatcaattttaccagttttaggatccgtagcgtaatctttgatggcagactttatcagt 4423 Query: 268 ctcactgcttcttccacatcttcaagttcaactctttcacttaacctcatcttagcatga 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4422 ctcactgcttcttccacatcttcaagttcaactctttcacttaacctcatcttagcatga 4363 Query: 328 gcttctgaaagtctaatcatactttctaactgtcttgttgttgcggtaattcttttttca 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4362 gcttctgaaagtctaatcatactttctaactgtcttgttgttgcggtaattcttttttca 4303 Query: 388 tctgatctactgtcatcacccatctttctcataccgacatatgccctcacaagttcagtc 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4302 tctgatctactgtcatcacccatctttctcataccgacatatgccctcacaagttcagtc 4243 Query: 448 ttggctgactcagttattaccgggtgaatgttttgttttgcatagttgatgtaggctgtc 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4242 ttggctgactcagttattaccgggtgaatgttttgttttgcatagttgatgtaggctgtc 4183 Query: 508 aagaattcaactggtagaatatcaccttgagatacagaatccggtctgtcttccaggtat 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4182 aagaattcaactggtagaatatcaccttgagatacagaatccggtctgtcttccaggtat 4123 Query: 568 aaactggttaaatgcttagcgagttcacgatcagacgcttcgttgaccttgtcaagcact 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4122 aaactggttaaatgcttagcgagttcacgatcagacgcttcgttgaccttgtcaagcact 4063 Query: 628 agataaacgagatcaaatcttgataataatggaggcggcaaatcaatattttcagtcaca 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4062 agataaacgagatcaaatcttgataataatggaggcggcaaatcaatattttcagtcaca 4003 Query: 688 ggaagattaggattgtacctagagttgataggattggcactagccagaattgaagttcta 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4002 ggaagattaggattgtacctagagttgataggattggcactagccagaattgaagttcta 3943 Query: 748 gcatttaaagttgtaataatacctgcttttgcaatagagattgttttgtgntccataact 807 |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 3942 gcatttaaagttgtaataatacctgcttttgcaatagagattgtttgttgttccataact 3883 Query: 808 tcatgtaatactgatctagtattatcgttcatcttatcaaattcatcaatacaacacaca 867 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3882 tcatgtaatactgatctagtattatcgttcatcttatcaaattcatcaatacaacacaca 3823 Query: 868 ccaccgtcagagagaactaaagcaccactttcc-acaccanttgcttagtatccacatct 926 ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 3822 ccaccgtcagagagaactaaagcaccactttccaacaccagttgcttagtatccacatct 3763 Query: 927 nctgttacataagcagtttaaccaacagcag 957 ||| |||||||||||| |||||||||||| Sbjct: 3762 cttgtaacataagcagttaaaccaacagcag 3732 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6680 Number of Sequences: 1807 Number of extensions: 6680 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 957 length of database: 10,358,551 effective HSP length: 16 effective length of query: 941 effective length of database: 10,329,639 effective search space: 9720190299 effective search space used: 9720190299 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)