BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC19ZA06FM1.SCF screened BAC_end (963 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig412 1469 0.0 >3x_Contig412 Length = 2162 Score = 1469 bits (741), Expect = 0.0 Identities = 781/792 (98%), Gaps = 3/792 (0%) Strand = Plus / Plus Query: 86 tcttggcgacttgcaaatgtgggcctctgcgaccattcaattgtgtgtctatcttcaact 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1011 tcttggcgacttgcaaatgtgggcctctgcgaccattcaattgtgtgtctatcttcaact 1070 Query: 146 ttttccatagctctttatcttccgcatagaaccttaattgtgaaagatctttaacatctt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1071 ttttccatagctctttatcttccgcatagaaccttaattgtgaaagatctttaacatctt 1130 Query: 206 caatggtttgtattctcaaatcataaaaactggaatattcatataacggtatttctatca 265 |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1131 caatggtttgtagccacaaatcataaaaactggaatattcatataacggtatttctatca 1190 Query: 266 cttttcttaacgttcgaatgtaatgttgcggtgtcttgcatcgcagttttatttcgttaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1191 cttttcttaacgttcgaatgtaatgttgcggtgtcttgcatcgcagttttatttcgttaa 1250 Query: 326 gatacatgtgccaaaattcagcaccgaagaaatgcaatccaatgtaggattccgcaaagg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1251 gatacatgtgccaaaattcagcaccgaagaaatgcaatccaatgtaggattccgcaaagg 1310 Query: 386 catatttttggaaaagttgcttatcactgggcataattttattgcagatcttcaagtatt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1311 catatttttggaaaagttgcttatcactgggcataattttattgcagatcttcaagtatt 1370 Query: 446 ctacccatattaacaatgacctattgttgaaatactgaagagcattctcgaatatagcgt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1371 ctacccatattaacaatgacctattgttgaaatactgaagagcattctcgaatatagcgt 1430 Query: 506 gaaacttaccaaaattccctagtttatactccaatagtccgtattcgacatgataattct 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1431 gaaacttaccaaaattccctagtttatactccaatagtccgtattcgacatgataattct 1490 Query: 566 ccaaaaaggggaactggtagagtaatgattcatatgtcgatcgtactagctgaagaaggt 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1491 ccaaaaaggggaactggtagagtaatgattcatatgtcgatcgtactagctgaagaaggt 1550 Query: 626 ctttattaatagattttgagataggtgatgccttcagcaataaatgattcaaaagattct 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1551 ctttattaatagattttgagataggtgatgccttcagcaataaatgattcaaaagattct 1610 Query: 686 cccaatggtgcaaactttttggatatttgcatattaagagactgaattcagatagctttt 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1611 cccaatggtgcaaactttttggatatttgcatattaagagactgaattcagatagctttt 1670 Query: 746 gatcacctaatagattaagatcatcttccattttctttttcacagtactggcagagcaac 805 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1671 gatcacctaatagattaagatcatcttccatttcctttttcacagtactggcagagcaac 1730 Query: 806 gatgatttcagtgcgtttagctgcgtgctctactttgt--ttggtggctcatgagtt-aa 862 |||||||||||||||||||||||||||||||||||| | | ||||||||||||| || Sbjct: 1731 gatgatttcagtgcgtttagctgcgtgctctactttctcatgcttggctcatgagttaaa 1790 Query: 863 ctacgtgtatat 874 |||||||||||| Sbjct: 1791 ctacgtgtatat 1802 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7865 Number of Sequences: 1807 Number of extensions: 7865 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 1 length of query: 963 length of database: 10,358,551 effective HSP length: 16 effective length of query: 947 effective length of database: 10,329,639 effective search space: 9782168133 effective search space used: 9782168133 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)