BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC19ZA06FM1.SCF screened BAC_end
         (963 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig412                                                         1469   0.0  

>3x_Contig412 
          Length = 2162

 Score = 1469 bits (741), Expect = 0.0
 Identities = 781/792 (98%), Gaps = 3/792 (0%)
 Strand = Plus / Plus

                                                                        
Query: 86   tcttggcgacttgcaaatgtgggcctctgcgaccattcaattgtgtgtctatcttcaact 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1011 tcttggcgacttgcaaatgtgggcctctgcgaccattcaattgtgtgtctatcttcaact 1070

                                                                        
Query: 146  ttttccatagctctttatcttccgcatagaaccttaattgtgaaagatctttaacatctt 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1071 ttttccatagctctttatcttccgcatagaaccttaattgtgaaagatctttaacatctt 1130

                                                                        
Query: 206  caatggtttgtattctcaaatcataaaaactggaatattcatataacggtatttctatca 265
            ||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 caatggtttgtagccacaaatcataaaaactggaatattcatataacggtatttctatca 1190

                                                                        
Query: 266  cttttcttaacgttcgaatgtaatgttgcggtgtcttgcatcgcagttttatttcgttaa 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 cttttcttaacgttcgaatgtaatgttgcggtgtcttgcatcgcagttttatttcgttaa 1250

                                                                        
Query: 326  gatacatgtgccaaaattcagcaccgaagaaatgcaatccaatgtaggattccgcaaagg 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1251 gatacatgtgccaaaattcagcaccgaagaaatgcaatccaatgtaggattccgcaaagg 1310

                                                                        
Query: 386  catatttttggaaaagttgcttatcactgggcataattttattgcagatcttcaagtatt 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1311 catatttttggaaaagttgcttatcactgggcataattttattgcagatcttcaagtatt 1370

                                                                        
Query: 446  ctacccatattaacaatgacctattgttgaaatactgaagagcattctcgaatatagcgt 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1371 ctacccatattaacaatgacctattgttgaaatactgaagagcattctcgaatatagcgt 1430

                                                                        
Query: 506  gaaacttaccaaaattccctagtttatactccaatagtccgtattcgacatgataattct 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1431 gaaacttaccaaaattccctagtttatactccaatagtccgtattcgacatgataattct 1490

                                                                        
Query: 566  ccaaaaaggggaactggtagagtaatgattcatatgtcgatcgtactagctgaagaaggt 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1491 ccaaaaaggggaactggtagagtaatgattcatatgtcgatcgtactagctgaagaaggt 1550

                                                                        
Query: 626  ctttattaatagattttgagataggtgatgccttcagcaataaatgattcaaaagattct 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1551 ctttattaatagattttgagataggtgatgccttcagcaataaatgattcaaaagattct 1610

                                                                        
Query: 686  cccaatggtgcaaactttttggatatttgcatattaagagactgaattcagatagctttt 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1611 cccaatggtgcaaactttttggatatttgcatattaagagactgaattcagatagctttt 1670

                                                                        
Query: 746  gatcacctaatagattaagatcatcttccattttctttttcacagtactggcagagcaac 805
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1671 gatcacctaatagattaagatcatcttccatttcctttttcacagtactggcagagcaac 1730

                                                                        
Query: 806  gatgatttcagtgcgtttagctgcgtgctctactttgt--ttggtggctcatgagtt-aa 862
            |||||||||||||||||||||||||||||||||||| |  |   ||||||||||||| ||
Sbjct: 1731 gatgatttcagtgcgtttagctgcgtgctctactttctcatgcttggctcatgagttaaa 1790

                        
Query: 863  ctacgtgtatat 874
            ||||||||||||
Sbjct: 1791 ctacgtgtatat 1802


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7865
Number of Sequences: 1807
Number of extensions: 7865
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 963
length of database: 10,358,551
effective HSP length: 16
effective length of query: 947
effective length of database: 10,329,639
effective search space: 9782168133
effective search space used: 9782168133
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)