BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC19ZA09FM1.SCF screened BAC_end
         (971 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1319                                                        1509   0.0  

>3x_Contig1319 
          Length = 7600

 Score = 1509 bits (761), Expect = 0.0
 Identities = 838/857 (97%), Gaps = 5/857 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   tgaaggtaaacgtcatattttgaattggtgtcgatcgtgaagcctctataacggcctatc 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3855 tgaaggtaaacgtcatattttgaattggtgtcgatcgtgaagcctctataacggcctatc 3796

                                                                        
Query: 146  acaactttgttaccatcaggtttgttctctatttgaacaatatcaccgcctttgtcgttt 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3795 acaactttgttaccatcaggtttgttctctatttgaacaatatcaccgcctttgtcgttt 3736

                                                                        
Query: 206  gaatagcataatctgtagatataggaattaagttcgctatcgacacagaaatcctttaaa 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3735 gaatagcataatctgtagatataggaattaagttcgctatcgacacagaaatcctttaaa 3676

                                                                        
Query: 266  ttatttagcaacgtgccaacttgtttgtggatcaattgtgactctgagtattctccacct 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3675 ttatttagcaacgtgccaacttgtttgtggatcaattgtgactctgagtattctccacct 3616

                                                                        
Query: 326  tggtcgttcaatttctgtttcaattctatgatcttcttttctgtctttctgagcttcttt 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3615 tggtcgttcaatttctgtttcaattctatgatcttcttttctgtctttctgagcttcttt 3556

                                                                        
Query: 386  tttagtgagagtcgttgctctttcatgaatttgatctgggatcggtaggattgcaatgaa 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3555 tttagtgagagtcgttgctctttcatgaatttgatctgggatcggtaggattgcaatgaa 3496

                                                                        
Query: 446  gtagagaaaaagttcatacgatcgaatgcaccttggactatcctcattacaccccagtca 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3495 gtagagaaaaagttcatacgatcgaatgcaccttggactatcctcattacaccccagtca 3436

                                                                        
Query: 506  gaaccttccgttcctgagtcgactgcgatgtttggtgcctctttcccaatgaacagcaat 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3435 gaaccttccgttcctgagtcgactgcgatgtttggtgcctctttcccaatgaacagcaat 3376

                                                                        
Query: 566  aattcggaaaatgtgtcactgaaattctcagggaaatcaatggcgtacagggaatcctca 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3375 aattcggaaaatgtgtcactgaaattctcagggaaatcaatggcgtacagggaatcctca 3316

                                                                        
Query: 626  tatttggacatatacgacatataactgtcggtgaagctcttcactgcgccgtcttgaaaa 685
            |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3315 tatttggacatgaacgacatataactgtcggtgaagctcttcactgcgccgtcttgaaaa 3256

                                                                        
Query: 686  tttatgtcatgattttcaattatatcattctgcaatttgttggaactgttttattccatc 745
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3255 tttatgtcatgattttcaattatatca-tctgcaatttgttggaactgttttattccatc 3197

                                                                        
Query: 746  aaggagttaaatccttggttttatacttgacgttaatgattctctggattaagttagatt 805
            || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 3196 aa-gagttaaatccttggttttatacttgacgttaatgattctctggataaagttagatt 3138

                                                                        
Query: 806  tggcaacgattatcttcagagtatatttgcttttaccctcaaat-aaaattttggaagct 864
            |||||||||| ||||   |||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 3137 tggcaacgataatctcaggagtatatttgcttttaccctcaaataaaaatgttggaagct 3078

                                                                        
Query: 865  ctttatttaaga-attcattgatttggtcacgctgaataacgttcaagcggccggcagtc 923
            ||| | |||||| ||||||||||||||||||||||| || ||| |||||||||| ||| |
Sbjct: 3077 cttca-ttaagatattcattgatttggtcacgctgagtaccgtccaagcggccgtcaggc 3019

                             
Query: 924  tggaaggacttcttaaa 940
            |||||||||||||||||
Sbjct: 3018 tggaaggacttcttaaa 3002


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7196
Number of Sequences: 1807
Number of extensions: 7196
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 971
length of database: 10,358,551
effective HSP length: 16
effective length of query: 955
effective length of database: 10,329,639
effective search space: 9864805245
effective search space used: 9864805245
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)