BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC19ZA11FM1.SCF screened BAC_end (967 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1444 1616 0.0 >3x_Contig1444 Length = 7580 Score = 1616 bits (815), Expect = 0.0 Identities = 873/886 (98%), Gaps = 5/886 (0%) Strand = Plus / Plus Query: 85 cttcgacaatgcatcattcaaaaagaaagtcattcggccatactcatcggtcctcgatcc 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4135 cttcgacaatgcatcattcaaaaagaaagtcattcggccatactcatcggtcctcgatcc 4194 Query: 145 aattataaagatatgataataaagcatcatttggaggctttaagatcgacacacaacgaa 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4195 aattataaagatatgataataaagcatcatttggaggctttaagatcgacacacaacgaa 4254 Query: 205 caattcattgttatcaacttaaatggctctttacattcggaaaactctgcaattaacagt 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4255 caattcattgttatcaacttaaatggctctttacattcggaaaactctgcaattaacagt 4314 Query: 265 attgctgaacaattagaattcgaacttgcaaacagaaacgttaattcatcaaaaaaagtt 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4315 attgctgaacaattagaattcgaacttgcaaacagaaacgttaattcatcaaaaaaagtt 4374 Query: 325 aaagcagaagaattaggtttatctgaaggtactttgacagaagtctttgataacattcta 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4375 aaagcagaagaattaggtttatctgaaggtactttgacagaagtctttgataacattcta 4434 Query: 385 agattgttggactcatttactgtgactcctctaaagggtgtacactcacagaaagaaaaa 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4435 agattgttggactcatttactgtgactcctctaaagggtgtacactcacagaaagaaaaa 4494 Query: 445 tcagagcacgtaacgctagtgttcatatttgatgaaattgacaaatttgctggaccagtg 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4495 tcagagcacgtaacgctagtgttcatatttgatgaaattgacaaatttgctggaccagtg 4554 Query: 505 agacagacacttttgtataatttatttgacctagtagagacttcaaggataccagtttgt 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4555 agacagacacttttgtataatttatttgacctagtagagacttcaaggataccagtttgt 4614 Query: 565 gttcttggtcttactacaaagttggcaatcatgcaatttcttgaaaacagagtgaaatcc 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4615 gttcttggtcttactacaaagttggcaatcatgcaatttcttgaaaacagagtgaaatcc 4674 Query: 625 cggttttctcagcgaatcatatatatgccatcaatctcggattatgatcaattcaagcat 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4675 cggttttctcagcgaatcatatatatgccatcaatctcggattatgatcaattcaagcat 4734 Query: 685 gtattcaaagagctcttagaggtggatgattcaacaattcctgatcagcttcgatggaac 744 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4735 gtattcaaagagctcttagaggtggatgattcaacaattcctgatcagcttcgatggaac 4794 Query: 745 cagttcttggatgagacttt-aaaaatgacgattcagagatttctcgtattctgcgtcag 803 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4795 cagttcttggatgagactttaaaaaatgacgattcagagatttctcgtattctgcgtcag 4854 Query: 804 aactacgagaacttcaaagatatacaactatttacaaacgccatatttcccacagntgcc 863 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 4855 aactacgagaacttcaaagatatacaactattacaaaacgccatatttcccacagttgcc 4914 Query: 864 tttgtctaaaacatattctgaactagttgagagcttc-aaacatgcagcaaaataaaaaa 922 ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 4915 -ttgtctaaaacatattctgaactagttgagagcatcaaaacatgcagcaaaataaaaaa 4973 Query: 923 -tacttggcgaattaactcttagtatcaatttca-ctaagatcttg 966 |||||||||||| ||||||||| ||||||||| ||||||||||| Sbjct: 4974 gtacttggcgaatcaactcttagattcaatttcagctaagatcttg 5019 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8128 Number of Sequences: 1807 Number of extensions: 8128 Number of successful extensions: 63 Number of sequences better than 1.0e-20: 1 length of query: 967 length of database: 10,358,551 effective HSP length: 16 effective length of query: 951 effective length of database: 10,329,639 effective search space: 9823486689 effective search space used: 9823486689 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)