BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC19ZB04FM1.SCF screened BAC_end
         (934 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1303                                                        1576   0.0  

>3x_Contig1303 
          Length = 8112

 Score = 1576 bits (795), Expect = 0.0
 Identities = 825/831 (99%), Gaps = 3/831 (0%)
 Strand = Plus / Minus

                                                                        
Query: 87   ttgtggtttttatttacaagaacgctaatcataatcactttacaagaaattcagaaggaa 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1632 ttgtggtttttatttacaagaacgctaatcataatcactttacaagaaattcagaaggaa 1573

                                                                        
Query: 147  tttatcccaattttttcacaggtaaggactgggttttattataattattattttttttat 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1572 tttatcccaattttttcacaggtaaggactgggttttattataattattattttttttat 1513

                                                                        
Query: 207  tgacctttgaactttatcttcccttgtaaaggttaatttgccattgcataagttcatcta 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1512 tgacctttgaactttatcttcccttgtaaaggttaatttgccattgcataagttcatcta 1453

                                                                        
Query: 267  tctatagagcgttttgtctccggagtgctaaaatatcacaatgtcagataatgggccaga 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1452 tctatagagcgttttgtctccggagtgctaaaatatcacaatgtcagataatgggccaga 1393

                                                                        
Query: 327  tttgtggcttgagaagatcaagaaatgtcaggctttgacggagtctgagatgaaacagct 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1392 tttgtggcttgagaagatcaagaaatgtcaggctttgacggagtctgagatgaaacagct 1333

                                                                        
Query: 387  atgcgagatgatgaaggaactcttaatggaagaatcgaatattcagccggttcaatcgcc 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1332 atgcgagatgatgaaggaactcttaatggaagaatcgaatattcagccggttcaatcgcc 1273

                                                                        
Query: 447  ggtgactgtttgtggtgatattcacggacaatttcatgaccttttagaactattcagaac 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1272 ggtgactgtttgtggtgatattcacggacaatttcatgaccttttagaactattcagaac 1213

                                                                        
Query: 507  tgctggtgggtttcctgatcaagtaaactatatttttcttggtgactatgtagatcgtgg 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1212 tgctggtgggtttcctgatcaagtaaactatatttttcttggtgactatgtagatcgtgg 1153

                                                                        
Query: 567  ttattacagtttggagacgttcacacttcttatgtgtttgaaagtgaaatatccttccag 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1152 ttattacagtttggagacgttcacacttcttatgtgtttgaaagtgaaatatccttccag 1093

                                                                        
Query: 627  aattactttggttagaggaaatcatgagtcgaggcaaattacacaagtttatgggtttta 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1092 aattactttggttagaggaaatcatgagtcgaggcaaattacacaagtttatgggtttta 1033

                                                                        
Query: 687  tgaggaatgtttaaataagtatggttccacaacggtttggaagtattgttgtcaagtgtt 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1032 tgaggaatgtttaaataagtatggttccacaacggtttggaagtattgttgtcaagtgtt 973

                                                                        
Query: 747  tgatttcttaacttttgcagctattattgacgggaaaa-tttatgtgtgcatggtggttt 805
            ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 972  tgatttcttaactttggcagctattattgacgggaaaattttatgtgtgcatggtggttt 913

                                                                        
Query: 806  gtctcccgaga-tagaatgcttgatcagatcagagttctatcgagagccc-agaagttcc 863
            ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 912  gtctcccgagattagaatgcttgatcagatcagagttctatcgagagcccaagaagttcc 853

                                                               
Query: 864  tcatgaaagtggcttttccgatttgttatggagtgaccccgacaacgtgga 914
            ||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 852  tcatgaaggtggcttctccgatttgttatggagtgaccccgacaacgtgga 802


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7212
Number of Sequences: 1807
Number of extensions: 7212
Number of successful extensions: 68
Number of sequences better than 1.0e-20: 1
length of query: 934
length of database: 10,358,551
effective HSP length: 16
effective length of query: 918
effective length of database: 10,329,639
effective search space: 9482608602
effective search space used: 9482608602
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)