BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC19ZB05RM1.SCF screened BAC_end
         (960 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig551                                                         1612   0.0  

>3x_Contig551 
          Length = 2723

 Score = 1612 bits (813), Expect = 0.0
 Identities = 894/916 (97%), Gaps = 5/916 (0%)
 Strand = Plus / Minus

                                                                        
Query: 48   ccgaattatttgaagaagcttgtaagatcgatccaagatccgaacaagccaagatcggtc 107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2453 ccgaattatttgaagaagcttgtaagatcgatccaagatccgaacaagccaagatcggtc 2394

                                                                        
Query: 108  ttgctcaactaaaattgcaacaagaagaaattgatgatgccattcaattgttcgaagatg 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2393 ttgctcaactaaaattgcaacaagaagaaattgatgatgccattcaattgttcgaagatg 2334

                                                                        
Query: 168  ctgccgatctctcaagatctttcgatgaaaaactacaagctactactttcgttgaggcta 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2333 ctgccgatctctcaagatctttcgatgaaaaactacaagctactactttcgctgaggcta 2274

                                                                        
Query: 228  ccaaggtccagaaaaagatcagagctgatccattcattaagggtaagatcgacgaagcta 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2273 ccaaggtccagaaaaagatcagagctgatccattcattaagggtaagatcgacgaagcta 2214

                                                                        
Query: 288  ttgcagcctaccgtgctcaaggtctcgcgtaaattagcatgatattcacgaatgaattta 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2213 ttgcagcctaccgtgctcaaggtctcgcgtaaattagcatgatattcacgaatgaattta 2154

                                                                        
Query: 348  attcatttcaatatgagtaaagctacaatagctcattgtttttgtctcaccttaatgacc 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2153 attcatttcaatatgagtaaagctacaatagctcattgtttttgtctcaccttaatgacc 2094

                                                                        
Query: 408  ataatggcaacataccatgcaacatctaaacgaatgaattaccaagaaagttatgatttt 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2093 ataatggcaacataccatgcaacatctaaacgaatgaattaccaagaaagttatgatttt 2034

                                                                        
Query: 468  acaaacaaaaagttgtagcatttcacccaagttatttatgactcgtaagcagcgtgaact 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2033 acaaacaaaaagttgtagcatttcacccaagttatttatgactcgtaagcagcgtgaact 1974

                                                                        
Query: 528  gtgttaat-cgtaaacgacaagatctcaacattacaacgtgaagaataagaaatagttat 586
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1973 gtgttaatgcgtaaacgacaagatctcaacattacaacgtgaagaataagaaatagttat 1914

                                                                        
Query: 587  caattcttcacaaaaacaagacaaaaagaaacacagaagaacaagaatacgagaacaacg 646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1913 caattcttcacaaaaacaagacaaaaagaaacacagaagaacaagaatacgagaacaacg 1854

                                                                        
Query: 647  cttttcaataacagctcattgcaaaatatgtgctcctaaatacccctggttcaaaaacat 706
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1853 cttttcaataacagctcattgcaaaatatgtgctcctaaatacccctggttcaaaaacat 1794

                                                                        
Query: 707  catcttctaccattttgctagaaacaaatacgtctttctgtatatacatgtatctccccc 766
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1793 catcttctaccattttgctagaaacaaatacgtctttctgtatatacatgtatctccccc 1734

                                                                        
Query: 767  atctcacaatntaatcaaattgtaattntaaacacttcgatagtatatca-ctacatacg 825
            |||||||||  |||||||||||||||| |||||||||||||||||||| |  ||||||||
Sbjct: 1733 atctcacaagttaatcaaattgtaattttaaacacttcgatagtatattatttacatacg 1674

                                                                        
Query: 826  tttcaacataaatgacattttntgttttctcttgaaag-agtgtatgtaaataaagtttc 884
            ||||||||||||||||||||| ||||||||| |||||| |||||||||||  ||||||||
Sbjct: 1673 tttcaacataaatgacattttttgttttctc-tgaaagaagtgtatgtaataaaagtttc 1615

                                                                        
Query: 885  ttgtgagaattatgggcaggtactgagtgaaagtgagctacaattc-agtacttcattgn 943
            |||||   |||||||  ||||||||||||||||||||||||||||| |||||||||||| 
Sbjct: 1614 ttgtgtagattatggcaaggtactgagtgaaagtgagctacaattcaagtacttcattgt 1555

                            
Query: 944  ntacggactatagcag 959
              ||||||||||||||
Sbjct: 1554 taacggactatagcag 1539


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8078
Number of Sequences: 1807
Number of extensions: 8078
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 960
length of database: 10,358,551
effective HSP length: 16
effective length of query: 944
effective length of database: 10,329,639
effective search space: 9751179216
effective search space used: 9751179216
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)