BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC19ZB05RM1.SCF screened BAC_end (960 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig551 1612 0.0 >3x_Contig551 Length = 2723 Score = 1612 bits (813), Expect = 0.0 Identities = 894/916 (97%), Gaps = 5/916 (0%) Strand = Plus / Minus Query: 48 ccgaattatttgaagaagcttgtaagatcgatccaagatccgaacaagccaagatcggtc 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2453 ccgaattatttgaagaagcttgtaagatcgatccaagatccgaacaagccaagatcggtc 2394 Query: 108 ttgctcaactaaaattgcaacaagaagaaattgatgatgccattcaattgttcgaagatg 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2393 ttgctcaactaaaattgcaacaagaagaaattgatgatgccattcaattgttcgaagatg 2334 Query: 168 ctgccgatctctcaagatctttcgatgaaaaactacaagctactactttcgttgaggcta 227 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2333 ctgccgatctctcaagatctttcgatgaaaaactacaagctactactttcgctgaggcta 2274 Query: 228 ccaaggtccagaaaaagatcagagctgatccattcattaagggtaagatcgacgaagcta 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2273 ccaaggtccagaaaaagatcagagctgatccattcattaagggtaagatcgacgaagcta 2214 Query: 288 ttgcagcctaccgtgctcaaggtctcgcgtaaattagcatgatattcacgaatgaattta 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2213 ttgcagcctaccgtgctcaaggtctcgcgtaaattagcatgatattcacgaatgaattta 2154 Query: 348 attcatttcaatatgagtaaagctacaatagctcattgtttttgtctcaccttaatgacc 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2153 attcatttcaatatgagtaaagctacaatagctcattgtttttgtctcaccttaatgacc 2094 Query: 408 ataatggcaacataccatgcaacatctaaacgaatgaattaccaagaaagttatgatttt 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2093 ataatggcaacataccatgcaacatctaaacgaatgaattaccaagaaagttatgatttt 2034 Query: 468 acaaacaaaaagttgtagcatttcacccaagttatttatgactcgtaagcagcgtgaact 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2033 acaaacaaaaagttgtagcatttcacccaagttatttatgactcgtaagcagcgtgaact 1974 Query: 528 gtgttaat-cgtaaacgacaagatctcaacattacaacgtgaagaataagaaatagttat 586 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1973 gtgttaatgcgtaaacgacaagatctcaacattacaacgtgaagaataagaaatagttat 1914 Query: 587 caattcttcacaaaaacaagacaaaaagaaacacagaagaacaagaatacgagaacaacg 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1913 caattcttcacaaaaacaagacaaaaagaaacacagaagaacaagaatacgagaacaacg 1854 Query: 647 cttttcaataacagctcattgcaaaatatgtgctcctaaatacccctggttcaaaaacat 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1853 cttttcaataacagctcattgcaaaatatgtgctcctaaatacccctggttcaaaaacat 1794 Query: 707 catcttctaccattttgctagaaacaaatacgtctttctgtatatacatgtatctccccc 766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1793 catcttctaccattttgctagaaacaaatacgtctttctgtatatacatgtatctccccc 1734 Query: 767 atctcacaatntaatcaaattgtaattntaaacacttcgatagtatatca-ctacatacg 825 ||||||||| |||||||||||||||| |||||||||||||||||||| | |||||||| Sbjct: 1733 atctcacaagttaatcaaattgtaattttaaacacttcgatagtatattatttacatacg 1674 Query: 826 tttcaacataaatgacattttntgttttctcttgaaag-agtgtatgtaaataaagtttc 884 ||||||||||||||||||||| ||||||||| |||||| ||||||||||| |||||||| Sbjct: 1673 tttcaacataaatgacattttttgttttctc-tgaaagaagtgtatgtaataaaagtttc 1615 Query: 885 ttgtgagaattatgggcaggtactgagtgaaagtgagctacaattc-agtacttcattgn 943 ||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1614 ttgtgtagattatggcaaggtactgagtgaaagtgagctacaattcaagtacttcattgt 1555 Query: 944 ntacggactatagcag 959 |||||||||||||| Sbjct: 1554 taacggactatagcag 1539 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8078 Number of Sequences: 1807 Number of extensions: 8078 Number of successful extensions: 67 Number of sequences better than 1.0e-20: 1 length of query: 960 length of database: 10,358,551 effective HSP length: 16 effective length of query: 944 effective length of database: 10,329,639 effective search space: 9751179216 effective search space used: 9751179216 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)