BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC19ZB10FM1.SCF screened BAC_end
         (955 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1486                                                        1562   0.0  

>3x_Contig1486 
          Length = 12131

 Score = 1562 bits (788), Expect = 0.0
 Identities = 851/866 (98%), Gaps = 5/866 (0%)
 Strand = Plus / Minus

                                                                        
Query: 88   tatcttcttctcctgttcagaaacactttgagtacaaatcaatgcactcttgatatctgg 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2959 tatcttcttctcctgttcagaaacactttgagtacaaatcaatgcactcttgatatctgg 2900

                                                                        
Query: 148  gatttgatacaacatcaatattgatcaatcacgtcgttcttgctcaacggtatctgctgt 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2899 gatttgatacaacatcaatattgatcaatcacgtcgttcttgctcaacggtatctgctgt 2840

                                                                        
Query: 208  ggcagtttttatgagttccttttatagtgcataagtaagatcaaatgttttggttgattc 267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2839 ggcagtttttatgagttccttttatagtgcataagtaagatcaaatgttttggttgattc 2780

                                                                        
Query: 268  aatatataaaatttttttaatatgttaacaataatcctattaaactaatatcaaacgaat 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2779 aatatataaaatttttttaatatgttaacaataatcctattaaactaatatcaaacgaat 2720

                                                                        
Query: 328  tcaacatggcactagtgactgacattaataaaggataactgcgatctgattatagttaca 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2719 tcaacatggcactagtgactgacattaataaaggataactgcgatctgattatagttaca 2660

                                                                        
Query: 388  ctaacatcgaccttcaatacaccgaaagattctagaaaaagtctaaaatgtccggctcta 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2659 ctaacatcgaccttcaatacaccgaaagattctagaaaaagtctaaaatgtccggctcta 2600

                                                                        
Query: 448  aagtaggagctcctatggtacctccaatcaattgcatatacaactaccttcatcatcaga 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2599 aagtaggagctcctatggtacctccaatcaattgcatatacaactaccttcatcatcaga 2540

                                                                        
Query: 508  caacagtaacgttttggttatacgaacaagtacagacacgtataagaggcaagatcagag 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2539 caacagtaacgttttggttatacgaacaagtacagacacgtataagaggcaagatcagag 2480

                                                                        
Query: 568  gctttgatgagttcatgaatgtggtaatagatgacgctttcgaaatagctgtagatccga 627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2479 gctttgatgagttcatgaatgtggtaatagatgacgctttcgaaatagctgtagatccga 2420

                                                                        
Query: 628  aaagtggtaaagagagcgatgataaagcagtgtttcttgggagaattatgttgaaaggtg 687
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2419 aaagtggtaaagagagcgatgataaagcagtgtttcttgggagaattatgttgaaaggtg 2360

                                                                        
Query: 688  ataatataacacttgttgtggcaaattgataatgcctactcagaaaatgataataggatg 747
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2359 ataatataacacttgttgtggcaaattgataatgcctactcagaaaatgataataggatg 2300

                                                                        
Query: 748  aaagaaagatgcttagagtgtagaagcattgatcggactctgtcgtgtaattatataagc 807
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2299 aaagaaagatgcttagagtgtagaagcattgatcggactctgtcgtgtaattatataagc 2240

                                                                        
Query: 808  ctgtatattataacggaaaaatgaaaggcactgtaaatttcgataacggcgaacagcact 867
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||
Sbjct: 2239 ctgtatattataacggaaaaatgaaaggcactg-aaatttcgataacggcgacaagcact 2181

                                                                        
Query: 868  atcaggcctaataaaggatatattgntcgtaatcttatngaatcttattacaatgtgttt 927
            |||| | |||||||| ||||||||| |||||||||||| | ||||  |||||||||| ||
Sbjct: 2180 atcaaggctaataaa-gatatattgttcgtaatcttatgg-atctatttacaatgtg-tt 2124

                                      
Query: 928  gctcaaaatggggagaaataccttaa 953
            ||||| | ||||||| ||||||||||
Sbjct: 2123 gctcagattggggag-aataccttaa 2099


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6826
Number of Sequences: 1807
Number of extensions: 6826
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 955
length of database: 10,358,551
effective HSP length: 16
effective length of query: 939
effective length of database: 10,329,639
effective search space: 9699531021
effective search space used: 9699531021
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)