BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC19ZB10FM1.SCF screened BAC_end (955 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1486 1562 0.0 >3x_Contig1486 Length = 12131 Score = 1562 bits (788), Expect = 0.0 Identities = 851/866 (98%), Gaps = 5/866 (0%) Strand = Plus / Minus Query: 88 tatcttcttctcctgttcagaaacactttgagtacaaatcaatgcactcttgatatctgg 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2959 tatcttcttctcctgttcagaaacactttgagtacaaatcaatgcactcttgatatctgg 2900 Query: 148 gatttgatacaacatcaatattgatcaatcacgtcgttcttgctcaacggtatctgctgt 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2899 gatttgatacaacatcaatattgatcaatcacgtcgttcttgctcaacggtatctgctgt 2840 Query: 208 ggcagtttttatgagttccttttatagtgcataagtaagatcaaatgttttggttgattc 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2839 ggcagtttttatgagttccttttatagtgcataagtaagatcaaatgttttggttgattc 2780 Query: 268 aatatataaaatttttttaatatgttaacaataatcctattaaactaatatcaaacgaat 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2779 aatatataaaatttttttaatatgttaacaataatcctattaaactaatatcaaacgaat 2720 Query: 328 tcaacatggcactagtgactgacattaataaaggataactgcgatctgattatagttaca 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2719 tcaacatggcactagtgactgacattaataaaggataactgcgatctgattatagttaca 2660 Query: 388 ctaacatcgaccttcaatacaccgaaagattctagaaaaagtctaaaatgtccggctcta 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2659 ctaacatcgaccttcaatacaccgaaagattctagaaaaagtctaaaatgtccggctcta 2600 Query: 448 aagtaggagctcctatggtacctccaatcaattgcatatacaactaccttcatcatcaga 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2599 aagtaggagctcctatggtacctccaatcaattgcatatacaactaccttcatcatcaga 2540 Query: 508 caacagtaacgttttggttatacgaacaagtacagacacgtataagaggcaagatcagag 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2539 caacagtaacgttttggttatacgaacaagtacagacacgtataagaggcaagatcagag 2480 Query: 568 gctttgatgagttcatgaatgtggtaatagatgacgctttcgaaatagctgtagatccga 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2479 gctttgatgagttcatgaatgtggtaatagatgacgctttcgaaatagctgtagatccga 2420 Query: 628 aaagtggtaaagagagcgatgataaagcagtgtttcttgggagaattatgttgaaaggtg 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2419 aaagtggtaaagagagcgatgataaagcagtgtttcttgggagaattatgttgaaaggtg 2360 Query: 688 ataatataacacttgttgtggcaaattgataatgcctactcagaaaatgataataggatg 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2359 ataatataacacttgttgtggcaaattgataatgcctactcagaaaatgataataggatg 2300 Query: 748 aaagaaagatgcttagagtgtagaagcattgatcggactctgtcgtgtaattatataagc 807 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2299 aaagaaagatgcttagagtgtagaagcattgatcggactctgtcgtgtaattatataagc 2240 Query: 808 ctgtatattataacggaaaaatgaaaggcactgtaaatttcgataacggcgaacagcact 867 ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 2239 ctgtatattataacggaaaaatgaaaggcactg-aaatttcgataacggcgacaagcact 2181 Query: 868 atcaggcctaataaaggatatattgntcgtaatcttatngaatcttattacaatgtgttt 927 |||| | |||||||| ||||||||| |||||||||||| | |||| |||||||||| || Sbjct: 2180 atcaaggctaataaa-gatatattgttcgtaatcttatgg-atctatttacaatgtg-tt 2124 Query: 928 gctcaaaatggggagaaataccttaa 953 ||||| | ||||||| |||||||||| Sbjct: 2123 gctcagattggggag-aataccttaa 2099 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6826 Number of Sequences: 1807 Number of extensions: 6826 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 955 length of database: 10,358,551 effective HSP length: 16 effective length of query: 939 effective length of database: 10,329,639 effective search space: 9699531021 effective search space used: 9699531021 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)