BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC19ZB11FM1.SCF screened BAC_end (960 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig858 1675 0.0 >3x_Contig858 Length = 3029 Score = 1675 bits (845), Expect = 0.0 Identities = 868/874 (99%), Gaps = 2/874 (0%) Strand = Plus / Minus Query: 84 atcaaaaggataaaccctccgatgaactacttgaaagttaatgtaaatgcagtcattccc 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1264 atcaaaaggataaaccctccgatgaactacttgaaagttaatgtaaatgcagtcattccc 1205 Query: 144 tcttattctcatacccgaagctactgtcttggtttttcaatgaacttcatatgaagttga 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1204 tcttattctcatacccgaagctactgtcttggtttttcaatgaacttcatatgaagttga 1145 Query: 204 gtatatagataaccataaaatcttttagaattaacaactatagctgctaaagttgtccac 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1144 gtatatagataaccataaaatcttttagaattaacaactatagctgctaaagttgtccac 1085 Query: 264 aattactactgtaatattatcattgtcatgtgtaaaactcaacttgtttgtgatttacaa 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1084 aattactactgtaatattatcattgtcatgtgtaaaactcaacttgtttgtgatttacaa 1025 Query: 324 taaaaatctcgttagtttgaaagggtgacatttactcatttcataattaactaactcgga 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1024 taaaaatctcgttagtttgaaagggtgacatttactcatttcataattaactaactcgga 965 Query: 384 agagagagctttcgagaaatagagctaaatctttgaagcatgtaataaactgccatattc 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 964 agagagagctttcgagaaatagagctaaatctttgaagcatgtaataaactgccatattc 905 Query: 444 ggtttaatcagccaaatcctgtaccaactgtatattccccccatcaaaaaaagagagatt 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 904 ggtttaatcagccaaatcctgtaccaactgtatattccccccatcaaaaaaagagagatt 845 Query: 504 ctggcgaatgtttatttgagttctttctttttagcatattatgaaaattttctgaacttg 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 844 ctggcgaatgtttatttgagttctttctttttagcatattatgaaaattttctgaacttg 785 Query: 564 aaaaagaagcgatgagatgagatgagcttatacagtagtaactgcactatgggtagcatt 623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 784 aaaaagaagcgatgagatgagatgagcttatacagtagtaactgcactatgggtagcatt 725 Query: 624 aaataacaacatatacattcttattctctctcgtaggacaatacagcactacagatatgg 683 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 aaataacaacatatacattcttattctctctcgtaggacaatacagcactacagatatgg 665 Query: 684 cagccacgtcgaaaaagttgaacaagcgtcaattggaatctaaggagtcgaaggattctg 743 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 664 cagccacgtcgaaaaagttgaacaagcgtcaattggaatctaaggagtcgaaggattctg 605 Query: 744 gtaaaattgtaaaaagagctaaaaacattagtgttgattctggcgatgaagattctgatg 803 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 604 gtaaaattgtaaaaagagctaaaaacattagtgttgattctggcgatgaagattctgatg 545 Query: 804 atgtcctccacggtttatcttcagaagatgagctagatgatgaattagatgatgctagct 863 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 atgtcctccacggtttatcttcagaagatgagctagatgatgaattagatgatgctagct 485 Query: 864 canattcagattcagacgagctagacnacgaatctgatcaactggatgaatctgatgagg 923 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 484 caaattcagattcagacgagctagacaacgaatctgatcaactggatgaatctgatgagg 425 Query: 924 atcaagaaagatgctg-agatgagnaagatgctg 956 |||||| ||||||||| |||||| ||||||||| Sbjct: 424 atcaag-aagatgctgaagatgaagaagatgctg 392 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8716 Number of Sequences: 1807 Number of extensions: 8716 Number of successful extensions: 320 Number of sequences better than 1.0e-20: 1 length of query: 960 length of database: 10,358,551 effective HSP length: 16 effective length of query: 944 effective length of database: 10,329,639 effective search space: 9751179216 effective search space used: 9751179216 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)