BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC19ZC12FM1.SCF screened BAC_end (965 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig826 1287 0.0 >3x_Contig826 Length = 2477 Score = 1287 bits (649), Expect = 0.0 Identities = 790/833 (94%), Gaps = 3/833 (0%) Strand = Plus / Plus Query: 88 atttgttcgggcaatatttttgttttcatcgaggaaaaatccggtattaaacgatggact 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 936 atttgttcgggcaatatttttgttttcatcgaggaaaaatccggtattaaacgatggact 995 Query: 148 gacgggatcccctggtctccgtctttggttgttggtaagtttttggtgtataaagagttg 207 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 996 gacgggatcccctggtctccgtcaagggttgttggtaagtttttggtgtataaagagttg 1055 Query: 208 ttcagatctgaaatcggtggtggtggcggtagtgcgaagcagcagtcacgtgattctacg 267 |||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1056 ttcagatcgaatagcggtggtggtggcggtagtgcgaagcagcagtcacgtgattctacg 1115 Query: 268 aattattccaatacaggtagtaccggcgatgcctgcatcgccggtactgcgacatacagt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1116 aattattccaatacaggtagtaccggcgatgcctgcatcgccggtactgcgacatacagt 1175 Query: 328 tacagatcggatgggttgatcaagaaagccttttcgcttcgagttaaatcgaacgtggat 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1176 tacagatcggatgggttgatcaagaaagccttttcgcttcgagttaaatcgaacgtggat 1235 Query: 388 gagctagatccgacgcaggatcctcgtgatcgacatcttttcactatccatatcatctcg 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1236 gagctagatccgacgcaggatcctcgtgatcgacatcttttcactatccatatcatctcg 1295 Query: 448 tactatacgctggatgatatcacgaacggagttctcgtcacaccaagtgaaatggtacga 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1296 tactatacgctggatgatatcacgaacggagttctcgtcacaccaagtgaaatggtacga 1355 Query: 508 ttccagaaagtggttccgtcgcaacggttgttggatgcgttggaacatacgagtatcggg 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1356 ttccagaaagtggttccgtcgcaacggttgttggatgcgttggaacatacgagtatcggg 1415 Query: 568 aacttcaagactatcggatcggtgaaatcgaaaaagaagaagaaaccgtaccatcaacac 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1416 aacttcaagactatcggatcggtgaaatcgaaaaagaagaagaaaccgtaccatcaacac 1475 Query: 628 cagcagcatgaatatgaggtttaagttccggggctagccgctcctagcatttcttctttc 687 ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 1476 cagcagcatgaatatgaggttcaagttccggggctagccgctcctagcattccttctttc 1535 Query: 688 -agcagatgccttagcacatgccttagcaggtaccttcgcatatgtttgaacctccgcaa 746 ||||||||||| ||||||||||| |||||||||||||||| ||||||| |||||||||| Sbjct: 1536 aagcagatgcctcagcacatgcctcagcaggtaccttcgcagatgtttgtacctccgcaa 1595 Query: 747 aggatttttcatccgtttattttcccaccgtcttcacctgtcccttcaggccattcacca 806 |||||| | || |||| || ||||||||| || |||||| |||| ||||||| |||||| Sbjct: 1596 aggattatccaaccgtcgatattcccaccgcctccacctggccctccaggccagtcacca 1655 Query: 807 gcgttcccttcttactaccaac-aatgttttagtaggggacacaagtttaactgttcgca 865 ||||||||| |||||||||||| ||||| | || |||| ||||||| | ||||| |||| Sbjct: 1656 gcgttccctccttactaccaacaaatgtatcagcagggaacacaagctcaactg-ccgca 1714 Query: 866 tttcccttactactatttttccgtatattatcaggaaatgtacctgaaagttt 918 | ||||||| ||||| |||||||||| | ||||||||||||| |||||||| Sbjct: 1715 gtacccttacaactatacttccgtatatcaccaggaaatgtacccgaaagttt 1767 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6465 Number of Sequences: 1807 Number of extensions: 6465 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 965 length of database: 10,358,551 effective HSP length: 16 effective length of query: 949 effective length of database: 10,329,639 effective search space: 9802827411 effective search space used: 9802827411 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)