BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC19ZD05FM1.SCF screened BAC_end (977 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1329 1612 0.0 >3x_Contig1329 Length = 7405 Score = 1612 bits (813), Expect = 0.0 Identities = 876/887 (98%), Gaps = 8/887 (0%) Strand = Plus / Minus Query: 88 ttcttcgaaaagaccccattatagattcgacttgggttcagttcatttgtcttatcgtta 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6440 ttcttcgaaaagaccccattatagattcgacttgggttcagttcatttgtcttatcgtta 6381 Query: 148 ctgatttggtaaaactcatgctcgcggaaccattctggacatgttttgttcccacccatt 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6380 ctgatttggtaaaactcatgctcgcggaaccattctggacatgttttgttcccacccatt 6321 Query: 208 aaagacattgtaagcttcactagcttgctgtatgacatatatttgataaactgttcagca 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6320 aaagacattgtaagcttcactagcttgctgtatgacatatatttgataaactgttcagca 6261 Query: 268 ccaatcttggcgacctctggttctcttaaaataagaggattttttatccagtgagtctgc 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6260 ccaatcttggcgacctctggttctcttaaaataagaggattttttatccagtgagtctgc 6201 Query: 328 aacctttgcaaaacatgatgaattttttggtcaagaatcttcaatcgaagtgagctgatt 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6200 aacctttgcaaaacatgatgaattttttggtcaagaatcttcaatcgaagtgagctgatt 6141 Query: 388 tcaccatttattttttgcttgtcagcagcttctaacaatttagtaactttcttattagtc 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6140 tcaccatttattttttgcttgtcagcagcttctaacaatttagtaactttcttattagtc 6081 Query: 448 tttctgctcttcgagttgaagaactgcaaagtttgcttgaaccttggttggaactgttca 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6080 tttctgctcttcgagttgaagaactgcaaagtttgcttgaaccttggttggaactgttca 6021 Query: 508 gcttcattgttcatataatgaatttggtattccaaattgtccagcttgaaaatcagatta 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6020 gcttcattgttcatataatgaatttggtattccaaattgtccagcttgaaaatcagatta 5961 Query: 568 tctttacccatatctatcaaactcaaagtgcttggtttcggttgaccgtacttaactgag 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5960 tctttacccatatctatcaaactcaaagtgcttggtttcggttgaccgtacttaactgag 5901 Query: 628 ccggtgtcttcgtcgttgaatcgatgagatgctatttcttatgcgatgagctcttggaaa 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5900 ccggtgtcttcgtcgttgaatcgatgagatgctatttcttatgcgatgagctcttggaaa 5841 Query: 688 attttctgcaagaatattaaaggaaagtttaataagaaatatagaattatggaaagaana 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 5840 attttctgcaagaatattaaaggaaagtttaataagaaatatagaattatggaaagaaaa 5781 Query: 748 tacattgataaataaaatacgaccacaaacttcagcatgaggtttggagttgaacagcac 807 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5780 tacattgataaataaaatacgaccacaaacttcagcatgaggtttggagttgaacagcac 5721 Query: 808 tgcgtatcatatttaagttaaatatttgtatacaagttactaaagtgattgcaattgcna 867 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 5720 tgcgtatcatatttaagttaaatatttgtatacaagttactaaagtgattgcaattgc-a 5662 Query: 868 aatgagatttcgtatatgttttaaaataccannaatatgatcagnactgacatngcaaat 927 |||||||||||||||||| |||||||||||| ||||||||||| |||||||| |||||| Sbjct: 5661 aatgagatttcgtatatg-tttaaaatacca-aaatatgatcag-actgacat-gcaaat 5606 Query: 928 cggaaaaattatttaagaaaggtttagttcattgagcgaatttcctt 974 | ||||||||||||||| ||||||||| ||||||||||||| ||||| Sbjct: 5605 c-gaaaaattatttaag-aaggtttag-tcattgagcgaatctcctt 5562 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7477 Number of Sequences: 1807 Number of extensions: 7477 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 977 length of database: 10,358,551 effective HSP length: 16 effective length of query: 961 effective length of database: 10,329,639 effective search space: 9926783079 effective search space used: 9926783079 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)