BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC19ZD05FM1.SCF screened BAC_end
         (977 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1329                                                        1612   0.0  

>3x_Contig1329 
          Length = 7405

 Score = 1612 bits (813), Expect = 0.0
 Identities = 876/887 (98%), Gaps = 8/887 (0%)
 Strand = Plus / Minus

                                                                        
Query: 88   ttcttcgaaaagaccccattatagattcgacttgggttcagttcatttgtcttatcgtta 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6440 ttcttcgaaaagaccccattatagattcgacttgggttcagttcatttgtcttatcgtta 6381

                                                                        
Query: 148  ctgatttggtaaaactcatgctcgcggaaccattctggacatgttttgttcccacccatt 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6380 ctgatttggtaaaactcatgctcgcggaaccattctggacatgttttgttcccacccatt 6321

                                                                        
Query: 208  aaagacattgtaagcttcactagcttgctgtatgacatatatttgataaactgttcagca 267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6320 aaagacattgtaagcttcactagcttgctgtatgacatatatttgataaactgttcagca 6261

                                                                        
Query: 268  ccaatcttggcgacctctggttctcttaaaataagaggattttttatccagtgagtctgc 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6260 ccaatcttggcgacctctggttctcttaaaataagaggattttttatccagtgagtctgc 6201

                                                                        
Query: 328  aacctttgcaaaacatgatgaattttttggtcaagaatcttcaatcgaagtgagctgatt 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6200 aacctttgcaaaacatgatgaattttttggtcaagaatcttcaatcgaagtgagctgatt 6141

                                                                        
Query: 388  tcaccatttattttttgcttgtcagcagcttctaacaatttagtaactttcttattagtc 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6140 tcaccatttattttttgcttgtcagcagcttctaacaatttagtaactttcttattagtc 6081

                                                                        
Query: 448  tttctgctcttcgagttgaagaactgcaaagtttgcttgaaccttggttggaactgttca 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6080 tttctgctcttcgagttgaagaactgcaaagtttgcttgaaccttggttggaactgttca 6021

                                                                        
Query: 508  gcttcattgttcatataatgaatttggtattccaaattgtccagcttgaaaatcagatta 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6020 gcttcattgttcatataatgaatttggtattccaaattgtccagcttgaaaatcagatta 5961

                                                                        
Query: 568  tctttacccatatctatcaaactcaaagtgcttggtttcggttgaccgtacttaactgag 627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5960 tctttacccatatctatcaaactcaaagtgcttggtttcggttgaccgtacttaactgag 5901

                                                                        
Query: 628  ccggtgtcttcgtcgttgaatcgatgagatgctatttcttatgcgatgagctcttggaaa 687
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5900 ccggtgtcttcgtcgttgaatcgatgagatgctatttcttatgcgatgagctcttggaaa 5841

                                                                        
Query: 688  attttctgcaagaatattaaaggaaagtttaataagaaatatagaattatggaaagaana 747
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5840 attttctgcaagaatattaaaggaaagtttaataagaaatatagaattatggaaagaaaa 5781

                                                                        
Query: 748  tacattgataaataaaatacgaccacaaacttcagcatgaggtttggagttgaacagcac 807
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5780 tacattgataaataaaatacgaccacaaacttcagcatgaggtttggagttgaacagcac 5721

                                                                        
Query: 808  tgcgtatcatatttaagttaaatatttgtatacaagttactaaagtgattgcaattgcna 867
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5720 tgcgtatcatatttaagttaaatatttgtatacaagttactaaagtgattgcaattgc-a 5662

                                                                        
Query: 868  aatgagatttcgtatatgttttaaaataccannaatatgatcagnactgacatngcaaat 927
            |||||||||||||||||| ||||||||||||  ||||||||||| |||||||| ||||||
Sbjct: 5661 aatgagatttcgtatatg-tttaaaatacca-aaatatgatcag-actgacat-gcaaat 5606

                                                           
Query: 928  cggaaaaattatttaagaaaggtttagttcattgagcgaatttcctt 974
            | ||||||||||||||| ||||||||| ||||||||||||| |||||
Sbjct: 5605 c-gaaaaattatttaag-aaggtttag-tcattgagcgaatctcctt 5562


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7477
Number of Sequences: 1807
Number of extensions: 7477
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 977
length of database: 10,358,551
effective HSP length: 16
effective length of query: 961
effective length of database: 10,329,639
effective search space: 9926783079
effective search space used: 9926783079
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)