BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC19ZD05RM1.SCF screened BAC_end (960 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1123 1610 0.0 >3x_Contig1123 Length = 7020 Score = 1610 bits (812), Expect = 0.0 Identities = 894/913 (97%), Gaps = 7/913 (0%) Strand = Plus / Plus Query: 44 gcttcggtgtaccatttgatatatttttctaacaaatttatgttcttgttggcaacgtct 103 |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 5303 gcttcggtgtaccatttgatatcatcttctaacaaatttatgttcttgttggcaacgtct 5362 Query: 104 agtagttgatcacgattttctttagcattttctttcacttggatgctatgagattgcaac 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5363 agtagttgatcacgattttctttagcattttctttcacttggatgctatgagattgcaac 5422 Query: 164 cagtcgtaaatgtcatccgaagaccaagaatcaaataggtcgctctttaatttgttgtac 223 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 5423 cagtcgtaaatgtcatccgaagaccaagaatcaaataggtcgctctttaatttgttggac 5482 Query: 224 ttatcatatagttgtttcttggccaaatctaacgattccaatgcactcaatctctcctca 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5483 ttatcatatagttgtttcttggccaaatctaacgattccaatgcactcaatctctcctca 5542 Query: 284 gagtaaacttgagaggccttgtaaatgttttttctaacaagggacaacaattcttccttg 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5543 gagtaaacttgagaggccttgtaaatgttttttctaacaagggacaacaattcttccttg 5602 Query: 344 ttagccttagccttgtcataagtgacaccgtgcttatctaaccaggctttcaagtcataa 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5603 ttagccttagccttgtcataagtgacaccgtgcttatctaaccaggctttcaagtcataa 5662 Query: 404 tcatcccattgattgaagtaggattcagtcgaatagtaaccggaactacccagcttttta 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5663 tcatcccattgattgaagtaggattcagtcgaatagtaaccggaactacccagcttttta 5722 Query: 464 ttgattttatcgaaattctccttggccaatgacttcaaattgtcataagaagtatcggtg 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5723 ttgattttatcgaaattctccttggccaatgacttcaaattgtcataagaagtatcggtg 5782 Query: 524 tcgaacttgacaccagcgttcctcaaggttttcctcaaatccttcgcagaccaagtgtca 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5783 tcgaacttgacaccagcgttcctcaaggttttcctcaaatccttcgcagaccaagtgtca 5842 Query: 584 aataaccaattggaaatagactcagttgtgcttggttctgattggaagttccaccagtta 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5843 aataaccaattggaaatagactcagttgtgcttggttctgattggaagttccaccagtta 5902 Query: 644 tcttgatccctttcatccggccagactttccaccacggttttggttgcgcatgctcagac 703 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5903 tcttgatccctttcatccggccagactttccaccacggttttggttgcgcatgctcagac 5962 Query: 704 catttctgactagcgtaagccttcaattcttcaagtgaagtgtctgcatcctttttagca 763 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5963 catttctgactagcgtaa-ccttcaattcttcaagtgaagtgtctgcatcctttttagca 6021 Query: 764 gagtcaccagtgtccttc-aatattgaataatgtcttgactagaccaattttcanataga 822 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 6022 gagtcaccagtgtccttcaaatattgaataatgtcttgactagaccaattttcaaataga 6081 Query: 823 ttgttgcaaataactactttggcagcagctgcac-aaatatcaaagcactactaagcttc 881 ||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||| Sbjct: 6082 ttgttgcaaataactacttggcaagcagctgcacaaaatatcaaagcactactaagcttc 6141 Query: 882 atcctgcgtataaatattg-tattctgngtaat-agctatgtcaat-aatcttatttat- 937 ||||||||||| ||||||| ||||||| ||||| |||||||||||| ||||||||| || Sbjct: 6142 atcctgcgtattaatattgttattctgtgtaataagctatgtcaataaatcttattaata 6201 Query: 938 acanacactttaa 950 ||| ||||||||| Sbjct: 6202 acagacactttaa 6214 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7000 Number of Sequences: 1807 Number of extensions: 7000 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 960 length of database: 10,358,551 effective HSP length: 16 effective length of query: 944 effective length of database: 10,329,639 effective search space: 9751179216 effective search space used: 9751179216 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)