BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC19ZD08FM1.SCF screened BAC_end (966 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig614 1580 0.0 >3x_Contig614 Length = 2043 Score = 1580 bits (797), Expect = 0.0 Identities = 841/852 (98%), Gaps = 3/852 (0%) Strand = Plus / Minus Query: 96 cattgcatctgcatgaacggtagaagatgaaatatcaacttctggtggctgtaacggcac 155 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1420 cattgcatctgcatgaacggtagaagatgaaatatcaacttctggtggctgtaacggcac 1361 Query: 156 tgcagaacccataggaggcttgatagacttcgattgttgttgaaaatgtggtagcatcgc 215 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1360 tgcagaacccataggaggcttgatagacttcgattgttgttgaaaatgtggtagcatcgc 1301 Query: 216 agacaattgctgcagtggaagtagattgctcaaagctgggtcacttatagcagtcgcaac 275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1300 agacaattgctgcagtggaagtagattgctcaaagctgggtcacttatagcagtcgcaac 1241 Query: 276 gatatcagcggtagaattgggcaaagcagtaccacttgtctctgctagcacttgcgtagc 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1240 gatatcagcggtagaattgggcaaagcagtaccacttgtctctgctagcacttgcgtagc 1181 Query: 336 gctgactttattgccgttgttcatctctgagatagaataaacacattccgtgctaagtgc 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1180 gctgactttattgccgttgttcatctctgagatagaataaacacattccgtgctaagtgc 1121 Query: 396 gacacattttgaacatggattacctctgtcacatcgagtttttctcctacgacaagcata 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1120 gacacattttgaacatggattacctctgtcacatcgagtttttctcctacgacaagcata 1061 Query: 456 gcacacgtatgagactctatttcgcttcataacacgtttgttaccagcattgttcttatt 515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1060 gcacacgtatgagactctatttcgcttcataacacgtttgttaccagcattgttcttatt 1001 Query: 516 aacacccacggtactactagagttgttgcttgtattagaacttggtgtcgacttatctat 575 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1000 aacacccacggtactactagagttgttgcttgtattagaacttggtgtcgacttatctat 941 Query: 576 agtgctaggctgactatgtgaatggctgtgcgaataactctcatcagaagtaggtgatcc 635 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 940 agtgctaggctgactatgtgaatggctgtgcgaataactctcatcagaagtaggtgatcc 881 Query: 636 acgattattagcctgagaaacggtattccattcctttggtgccatgatcagatatacaag 695 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 880 acgattattagcctgagaaacggtattccattcctttggtgccatgatcagatatacaag 821 Query: 696 tcacaatggtacctgtctattcgattgtatacgtgttntttttgtattctgttagtcgat 755 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 820 tcacaatggtacctgtctattcgattgtatacgtgttttttttgtattctgttagtcgat 761 Query: 756 cg-aaaccaatccatgagtgtgatgagattacttaataagtaaaagtattccatatcgat 814 || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 760 cgaaaaccaatccatgagtgtgatgagattacttaataagtaaagtaattccatatcgat 701 Query: 815 gattctttgtttttatatatatacatacagaataatcgtaggataagcagggaaaaagct 874 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 700 gattctttgtttttatatatatacatacagaataatcgtagaataagcagggaaaaagct 641 Query: 875 gagaaaccctaaagaataagggtac-accatctattgcgactattttttttttgaattaa 933 |||||||| ||||||||| ||||| |||||||||||||||||||||||||| ||||||| Sbjct: 640 gagaaacctaaaagaataa-ggtacaaccatctattgcgactatttttttttagaattaa 582 Query: 934 aaaaaaaaaaaa 945 |||||||||||| Sbjct: 581 aaaaaaaaaaaa 570 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 15,630 Number of Sequences: 1807 Number of extensions: 15630 Number of successful extensions: 337 Number of sequences better than 1.0e-20: 1 length of query: 966 length of database: 10,358,551 effective HSP length: 16 effective length of query: 950 effective length of database: 10,329,639 effective search space: 9813157050 effective search space used: 9813157050 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)