BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC19ZD08FM1.SCF screened BAC_end
         (966 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig614                                                         1580   0.0  

>3x_Contig614 
          Length = 2043

 Score = 1580 bits (797), Expect = 0.0
 Identities = 841/852 (98%), Gaps = 3/852 (0%)
 Strand = Plus / Minus

                                                                        
Query: 96   cattgcatctgcatgaacggtagaagatgaaatatcaacttctggtggctgtaacggcac 155
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1420 cattgcatctgcatgaacggtagaagatgaaatatcaacttctggtggctgtaacggcac 1361

                                                                        
Query: 156  tgcagaacccataggaggcttgatagacttcgattgttgttgaaaatgtggtagcatcgc 215
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1360 tgcagaacccataggaggcttgatagacttcgattgttgttgaaaatgtggtagcatcgc 1301

                                                                        
Query: 216  agacaattgctgcagtggaagtagattgctcaaagctgggtcacttatagcagtcgcaac 275
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1300 agacaattgctgcagtggaagtagattgctcaaagctgggtcacttatagcagtcgcaac 1241

                                                                        
Query: 276  gatatcagcggtagaattgggcaaagcagtaccacttgtctctgctagcacttgcgtagc 335
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1240 gatatcagcggtagaattgggcaaagcagtaccacttgtctctgctagcacttgcgtagc 1181

                                                                        
Query: 336  gctgactttattgccgttgttcatctctgagatagaataaacacattccgtgctaagtgc 395
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1180 gctgactttattgccgttgttcatctctgagatagaataaacacattccgtgctaagtgc 1121

                                                                        
Query: 396  gacacattttgaacatggattacctctgtcacatcgagtttttctcctacgacaagcata 455
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1120 gacacattttgaacatggattacctctgtcacatcgagtttttctcctacgacaagcata 1061

                                                                        
Query: 456  gcacacgtatgagactctatttcgcttcataacacgtttgttaccagcattgttcttatt 515
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1060 gcacacgtatgagactctatttcgcttcataacacgtttgttaccagcattgttcttatt 1001

                                                                        
Query: 516  aacacccacggtactactagagttgttgcttgtattagaacttggtgtcgacttatctat 575
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1000 aacacccacggtactactagagttgttgcttgtattagaacttggtgtcgacttatctat 941

                                                                        
Query: 576  agtgctaggctgactatgtgaatggctgtgcgaataactctcatcagaagtaggtgatcc 635
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940  agtgctaggctgactatgtgaatggctgtgcgaataactctcatcagaagtaggtgatcc 881

                                                                        
Query: 636  acgattattagcctgagaaacggtattccattcctttggtgccatgatcagatatacaag 695
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880  acgattattagcctgagaaacggtattccattcctttggtgccatgatcagatatacaag 821

                                                                        
Query: 696  tcacaatggtacctgtctattcgattgtatacgtgttntttttgtattctgttagtcgat 755
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 820  tcacaatggtacctgtctattcgattgtatacgtgttttttttgtattctgttagtcgat 761

                                                                        
Query: 756  cg-aaaccaatccatgagtgtgatgagattacttaataagtaaaagtattccatatcgat 814
            || |||||||||||||||||||||||||||||||||||||||||   |||||||||||||
Sbjct: 760  cgaaaaccaatccatgagtgtgatgagattacttaataagtaaagtaattccatatcgat 701

                                                                        
Query: 815  gattctttgtttttatatatatacatacagaataatcgtaggataagcagggaaaaagct 874
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 700  gattctttgtttttatatatatacatacagaataatcgtagaataagcagggaaaaagct 641

                                                                        
Query: 875  gagaaaccctaaagaataagggtac-accatctattgcgactattttttttttgaattaa 933
            ||||||||  ||||||||| ||||| |||||||||||||||||||||||||| |||||||
Sbjct: 640  gagaaacctaaaagaataa-ggtacaaccatctattgcgactatttttttttagaattaa 582

                        
Query: 934  aaaaaaaaaaaa 945
            ||||||||||||
Sbjct: 581  aaaaaaaaaaaa 570


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,630
Number of Sequences: 1807
Number of extensions: 15630
Number of successful extensions: 337
Number of sequences better than 1.0e-20: 1
length of query: 966
length of database: 10,358,551
effective HSP length: 16
effective length of query: 950
effective length of database: 10,329,639
effective search space: 9813157050
effective search space used: 9813157050
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)