BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC19ZD08RM1.SCF screened BAC_end (962 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig361 904 0.0 >3x_Contig361 Length = 1383 Score = 904 bits (456), Expect = 0.0 Identities = 524/541 (96%), Gaps = 5/541 (0%) Strand = Plus / Minus Query: 424 caccatttcaactggatatccttcgtaaacttgtttgcgtccttgacggttctgtcatat 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1370 caccatttcaactggatatccttcgtaaacttgtttgcgtccttgacggttctgtcatat 1311 Query: 484 gcttcataaaacgcgacagcctcggaagagtaatttgaaagatcccgttcactcttagca 543 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1310 gcttcataaaacgcgaca-cctcggaagagtaatttgaaagatcccgttcactcttagca 1252 Query: 544 ctgctaggcgggttatccactttgggtatgctgacttgctgcgccggtggtggttgtcgt 603 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1251 ctgctaggcgggttatccactttgggtatgctgacttgctgcgccggtggtggttgtcgt 1192 Query: 604 gatactggcgtcgttaccgttgactgggagctntgtcttgtatctttctcatacatttgg 663 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1191 gatactggcgtcgttaccgttgactgggagctttgtcttgtatctttctcatacatttgg 1132 Query: 664 tatggaatattcgtatctgcaacatgattctggggcagatcatcaaccggatatggtgta 723 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1131 tatggaatattcgtatctgcaacatgattctggggcagatcatcaaccggatatggtgta 1072 Query: 724 ttcttacttggctcgtgacctggcgggtacatgtttatgtagttgccatacgcgtttctt 783 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1071 ttcttacttggctcgtgacctggcgggtacatgtttatgtagttgccatacgcgtttctt 1012 Query: 784 tgtcggttggtatccattctatttctctcagaagaacga-ttaccaatgtcctatccttt 842 ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| || Sbjct: 1011 tgtcggttgttatccattctatttctctcaagagaacgatttaccaatgtcctatcc-tt 953 Query: 843 tctacgaattcttcccgtgc-aacgctttcgaatccaatactacttgcagagcaactcac 901 |||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 952 tctacgaatttcttccgtgcaaacgctttcgaatccaatactacttgcagagcaactcac 893 Query: 902 tta-ccacagactcaagctgataccanagggcagtggtttcanaaacctagttgaaatgc 960 ||| |||||||||||||||||||||| ||||||||| || || || |||||||||||||| Sbjct: 892 ttacccacagactcaagctgataccagagggcagtgtttccagaagcctagttgaaatgc 833 Query: 961 t 961 | Sbjct: 832 t 832 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4787 Number of Sequences: 1807 Number of extensions: 4787 Number of successful extensions: 29 Number of sequences better than 1.0e-20: 1 length of query: 962 length of database: 10,358,551 effective HSP length: 16 effective length of query: 946 effective length of database: 10,329,639 effective search space: 9771838494 effective search space used: 9771838494 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)