BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC19ZD10FM1.SCF screened BAC_end
         (942 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1719                                                        1572   0.0  

>3x_Contig1719 
          Length = 15804

 Score = 1572 bits (793), Expect = 0.0
 Identities = 849/861 (98%), Gaps = 5/861 (0%)
 Strand = Plus / Plus

                                                                         
Query: 86    ccttacaaacattcacacaccattgtcattacttgatccaatttgatgacaagtgacaca 145
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14920 ccttacaaacattcacacaccattgtcattacttgatccaatttgatgacaagtgacaca 14979

                                                                         
Query: 146   aactttctcccgttatacagcacttcctgttaccttcactactgtagattctagtggtct 205
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14980 aactttctcccgttatacagcacttcctgttaccttcactactgtagattctagtggtct 15039

                                                                         
Query: 206   ttctttttcaacagtgttttttccccttcctcaatttcgcttcaagaggaaaaaaagccc 265
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15040 ttctttttcaacagtgttttttccccttcctcaatttcgcttcaagaggaaaaaaagccc 15099

                                                                         
Query: 266   gtcagttgagttggctgtttcaattgcaagtacagaaaacggtttgtactcagctagctt 325
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15100 gtcagttgagttggctgtttcaattgcaagtacagaaaacggtttgtactcagctagctt 15159

                                                                         
Query: 326   tcagtgtgtatattgttggaagtttgtagcttggatctaaagcgtcactgccgggatgat 385
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15160 tcagtgtgtatattgttggaagtttgtagcttggatctaaagcgtcactgccgggatgat 15219

                                                                         
Query: 386   tgtccagttttctcttattccagttaatttcatttttgtgtttgaacttgatatataaaa 445
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15220 tgtccagttttctcttattccagttaatttcatttttgtgtttgaacttgatatataaaa 15279

                                                                         
Query: 446   gacggacacaaaccgtcaaattgacagtttcgtggtgtctagttgtcgtagcttttctac 505
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15280 gacggacacaaaccgtcaaattgacagtttcgtggtgtctagttgtcgtagcttttctac 15339

                                                                         
Query: 506   tactgttaatttggattgataaataattcagtaggaaatagccccactaaaaaattcaag 565
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15340 tactgttaatttggattgataaataattcagtaggaaatagccccactaaaaaattcaag 15399

                                                                         
Query: 566   actctctcggtacttgaggagagaaattacatcatacaagatttcattttccaagttgat 625
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15400 actctctcggtacttgaggagagaaattacatcatacaagatttcattttccaagttgat 15459

                                                                         
Query: 626   aaattttattaggacaatgtcaatcaactcatcacaggatttagagaagggtgtcacgga 685
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15460 aaattttattaggacaatgtcaatcaactcatcacaggatttagagaagggtgtcacgga 15519

                                                                         
Query: 686   cacccaaaatattgaggattctcatcaaccgtaccagcaccatattcacaatgtttccat 745
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15520 cacccaaaatattgaggattctcatcaaccgtaccagcaccatattcacaatgtttccat 15579

                                                                         
Query: 746   cgatggggattacgtgcgtttgggtaatc-aacttat-agagatcggagttgctaaacgc 803
             ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 15580 cgatggggattacgtgcgtttgggtaatcaaacttataagagatcggagttgctaaacgc 15639

                                                                         
Query: 804   tttcgccggtgactttaaaccctgtatccatccacgtcctcctccagcttttgctaaccc 863
             |||||||||||||||||| ||  |||||||||||||||||||||||||||| ||||||||
Sbjct: 15640 tttcgccggtgactttaaccctggtatccatccacgtcctcctccagctttggctaaccc 15699

                                                                         
Query: 864   agttcctttgggtcttgcatcattctcatccttgttg-ttggggctttctttgattaa-g 921
             ||||||||||||||||||||||||||||| | ||||| |||| ||||||||||||||| |
Sbjct: 15700 agttcctttgggtcttgcatcattctcattc-tgttgtttggtgctttctttgattaatg 15758

                                  
Query: 922   cccaggttaaaggtgtcacaa 942
             ||||||||| |||||||||||
Sbjct: 15759 cccaggttagaggtgtcacaa 15779


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6971
Number of Sequences: 1807
Number of extensions: 6971
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 942
length of database: 10,358,551
effective HSP length: 16
effective length of query: 926
effective length of database: 10,329,639
effective search space: 9565245714
effective search space used: 9565245714
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)