BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC19ZD10FM1.SCF screened BAC_end (942 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1719 1572 0.0 >3x_Contig1719 Length = 15804 Score = 1572 bits (793), Expect = 0.0 Identities = 849/861 (98%), Gaps = 5/861 (0%) Strand = Plus / Plus Query: 86 ccttacaaacattcacacaccattgtcattacttgatccaatttgatgacaagtgacaca 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14920 ccttacaaacattcacacaccattgtcattacttgatccaatttgatgacaagtgacaca 14979 Query: 146 aactttctcccgttatacagcacttcctgttaccttcactactgtagattctagtggtct 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14980 aactttctcccgttatacagcacttcctgttaccttcactactgtagattctagtggtct 15039 Query: 206 ttctttttcaacagtgttttttccccttcctcaatttcgcttcaagaggaaaaaaagccc 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15040 ttctttttcaacagtgttttttccccttcctcaatttcgcttcaagaggaaaaaaagccc 15099 Query: 266 gtcagttgagttggctgtttcaattgcaagtacagaaaacggtttgtactcagctagctt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15100 gtcagttgagttggctgtttcaattgcaagtacagaaaacggtttgtactcagctagctt 15159 Query: 326 tcagtgtgtatattgttggaagtttgtagcttggatctaaagcgtcactgccgggatgat 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15160 tcagtgtgtatattgttggaagtttgtagcttggatctaaagcgtcactgccgggatgat 15219 Query: 386 tgtccagttttctcttattccagttaatttcatttttgtgtttgaacttgatatataaaa 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15220 tgtccagttttctcttattccagttaatttcatttttgtgtttgaacttgatatataaaa 15279 Query: 446 gacggacacaaaccgtcaaattgacagtttcgtggtgtctagttgtcgtagcttttctac 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15280 gacggacacaaaccgtcaaattgacagtttcgtggtgtctagttgtcgtagcttttctac 15339 Query: 506 tactgttaatttggattgataaataattcagtaggaaatagccccactaaaaaattcaag 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15340 tactgttaatttggattgataaataattcagtaggaaatagccccactaaaaaattcaag 15399 Query: 566 actctctcggtacttgaggagagaaattacatcatacaagatttcattttccaagttgat 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15400 actctctcggtacttgaggagagaaattacatcatacaagatttcattttccaagttgat 15459 Query: 626 aaattttattaggacaatgtcaatcaactcatcacaggatttagagaagggtgtcacgga 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15460 aaattttattaggacaatgtcaatcaactcatcacaggatttagagaagggtgtcacgga 15519 Query: 686 cacccaaaatattgaggattctcatcaaccgtaccagcaccatattcacaatgtttccat 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15520 cacccaaaatattgaggattctcatcaaccgtaccagcaccatattcacaatgtttccat 15579 Query: 746 cgatggggattacgtgcgtttgggtaatc-aacttat-agagatcggagttgctaaacgc 803 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 15580 cgatggggattacgtgcgtttgggtaatcaaacttataagagatcggagttgctaaacgc 15639 Query: 804 tttcgccggtgactttaaaccctgtatccatccacgtcctcctccagcttttgctaaccc 863 |||||||||||||||||| || |||||||||||||||||||||||||||| |||||||| Sbjct: 15640 tttcgccggtgactttaaccctggtatccatccacgtcctcctccagctttggctaaccc 15699 Query: 864 agttcctttgggtcttgcatcattctcatccttgttg-ttggggctttctttgattaa-g 921 ||||||||||||||||||||||||||||| | ||||| |||| ||||||||||||||| | Sbjct: 15700 agttcctttgggtcttgcatcattctcattc-tgttgtttggtgctttctttgattaatg 15758 Query: 922 cccaggttaaaggtgtcacaa 942 ||||||||| ||||||||||| Sbjct: 15759 cccaggttagaggtgtcacaa 15779 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6971 Number of Sequences: 1807 Number of extensions: 6971 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 942 length of database: 10,358,551 effective HSP length: 16 effective length of query: 926 effective length of database: 10,329,639 effective search space: 9565245714 effective search space used: 9565245714 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)