BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC19ZE03FM1.SCF screened BAC_end (950 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig798 1469 0.0 >3x_Contig798 Length = 3073 Score = 1469 bits (741), Expect = 0.0 Identities = 852/876 (97%), Gaps = 10/876 (1%) Strand = Plus / Plus Query: 85 catggaaggcatcagacggaggacctgccttcaaggaagaaaaaaacaagataaagggtt 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 catggaaggcatcagacggaggacctgccttcaaggaagaaaaaaacaagataaagggtt 342 Query: 145 aaaacagagcagtggtttggaatcagttttgtaatttaaaattgcagcttatctcaacct 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 343 aaaacagagcagtggtttggaatcagttttgtaatttaaaattgcagcttatctcaacct 402 Query: 205 aagcaattcgcatttaaccccacttccgactctaagctctgtttgccttagagaacagga 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 aagcaattcgcatttaaccccacttccgactctaagctctgtttgccttagagaacagga 462 Query: 265 tatttttggatcttcttttatcgaccttgattttacgaaacagttttgggtcaaattttt 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463 tatttttggatcttcttttatcgaccttgattttacgaaacagttttgggtcaaattttt 522 Query: 325 cctcttcaaacgagtctaaagcgtaatcatctggaatgaactgatgtaatggtacatgct 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 523 cctcttcaaacgagtctaaagcgtaatcatctggaatgaactgatgtaatggtacatgct 582 Query: 385 ccaagtttctactataatagcctgccctgacgttatccaatttttgttgcaattccaatc 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 ccaagtttctactataatagcctgccctgacgttatccaatttttgttgcaattccaatc 642 Query: 445 tttttttgtcatccacgaaagtcctaccagaggcatggttttgaaactcaatcatctcac 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 643 tttttttgtcatccacgaaagtcctaccagaggcatggttttgaaactcaatcatctcac 702 Query: 505 taactgaaaggtctacttcctcttgcaattctcttggtaactcggtcaagttacaggaat 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 703 taactgaaaggtctacttcctcttgcaattctcttggtaactcggtcaagttacaggaat 762 Query: 565 gctgatccctcaattccgtcttcttggccaggctcttattcttacttttccccatcagcg 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 763 gctgatccctcaattccgtcttcttggccaggctcttattcttacttttccccatcagcg 822 Query: 625 caatatctaagaactcattttctgtctctctaaacttgaaggcgaattcatcctttactt 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 823 caatatctaagaactcattttctgtctctctaaacttgaaggcgaattcatcctttactt 882 Query: 685 cactgctcccttgctggtttttggacgaggaagaagaggaaatggacaatttaaacggga 744 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 883 cactgctcccttgctggtttttggacgaggaagaagaggaatgggacaatttaaacggaa 942 Query: 745 acaatgancacatatctttcttaacgcgtaatattaaaat-gaagcggccgc-aaacaca 802 ||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 943 acaatgacaacatatctttcttaacgcgtaatattaaaatggaagcggccgcaaaacaca 1002 Query: 803 ca-gttaatacaat-agggtttgtgtgaatgtgtttgaatttttttt-aagtgtacttaa 859 || || |||||||| ||| ||||||||||||| ||||||||||||| |||||||||||| Sbjct: 1003 caggtaaatacaataaggttttgtgtgaatgttgttgaattttttttaaagtgtacttaa 1062 Query: 860 cacagtgccc-aacgactggctgca-gtggtgaacggttaatagta-ttaaaaacaggcg 916 |||||||||| |||||||||||||| ||||||| |||| | ||||| | ||||||||||| Sbjct: 1063 cacagtgcccaaacgactggctgcaggtggtgaccggtaattagtagtaaaaaacaggcg 1122 Query: 917 aattgta-ttatactttttcaaag-tgaacttgttt 950 ||||||| |||||||| ||||||| ||||||||||| Sbjct: 1123 aattgtagttatacttcttcaaagttgaacttgttt 1158 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7229 Number of Sequences: 1807 Number of extensions: 7229 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 1 length of query: 950 length of database: 10,358,551 effective HSP length: 16 effective length of query: 934 effective length of database: 10,329,639 effective search space: 9647882826 effective search space used: 9647882826 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)