BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC19ZE03FM1.SCF screened BAC_end
         (950 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig798                                                         1469   0.0  

>3x_Contig798 
          Length = 3073

 Score = 1469 bits (741), Expect = 0.0
 Identities = 852/876 (97%), Gaps = 10/876 (1%)
 Strand = Plus / Plus

                                                                        
Query: 85   catggaaggcatcagacggaggacctgccttcaaggaagaaaaaaacaagataaagggtt 144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283  catggaaggcatcagacggaggacctgccttcaaggaagaaaaaaacaagataaagggtt 342

                                                                        
Query: 145  aaaacagagcagtggtttggaatcagttttgtaatttaaaattgcagcttatctcaacct 204
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343  aaaacagagcagtggtttggaatcagttttgtaatttaaaattgcagcttatctcaacct 402

                                                                        
Query: 205  aagcaattcgcatttaaccccacttccgactctaagctctgtttgccttagagaacagga 264
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403  aagcaattcgcatttaaccccacttccgactctaagctctgtttgccttagagaacagga 462

                                                                        
Query: 265  tatttttggatcttcttttatcgaccttgattttacgaaacagttttgggtcaaattttt 324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463  tatttttggatcttcttttatcgaccttgattttacgaaacagttttgggtcaaattttt 522

                                                                        
Query: 325  cctcttcaaacgagtctaaagcgtaatcatctggaatgaactgatgtaatggtacatgct 384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523  cctcttcaaacgagtctaaagcgtaatcatctggaatgaactgatgtaatggtacatgct 582

                                                                        
Query: 385  ccaagtttctactataatagcctgccctgacgttatccaatttttgttgcaattccaatc 444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583  ccaagtttctactataatagcctgccctgacgttatccaatttttgttgcaattccaatc 642

                                                                        
Query: 445  tttttttgtcatccacgaaagtcctaccagaggcatggttttgaaactcaatcatctcac 504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643  tttttttgtcatccacgaaagtcctaccagaggcatggttttgaaactcaatcatctcac 702

                                                                        
Query: 505  taactgaaaggtctacttcctcttgcaattctcttggtaactcggtcaagttacaggaat 564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703  taactgaaaggtctacttcctcttgcaattctcttggtaactcggtcaagttacaggaat 762

                                                                        
Query: 565  gctgatccctcaattccgtcttcttggccaggctcttattcttacttttccccatcagcg 624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763  gctgatccctcaattccgtcttcttggccaggctcttattcttacttttccccatcagcg 822

                                                                        
Query: 625  caatatctaagaactcattttctgtctctctaaacttgaaggcgaattcatcctttactt 684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823  caatatctaagaactcattttctgtctctctaaacttgaaggcgaattcatcctttactt 882

                                                                        
Query: 685  cactgctcccttgctggtttttggacgaggaagaagaggaaatggacaatttaaacggga 744
            |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |
Sbjct: 883  cactgctcccttgctggtttttggacgaggaagaagaggaatgggacaatttaaacggaa 942

                                                                        
Query: 745  acaatgancacatatctttcttaacgcgtaatattaaaat-gaagcggccgc-aaacaca 802
            |||||||  ||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 943  acaatgacaacatatctttcttaacgcgtaatattaaaatggaagcggccgcaaaacaca 1002

                                                                        
Query: 803  ca-gttaatacaat-agggtttgtgtgaatgtgtttgaatttttttt-aagtgtacttaa 859
            || || |||||||| ||| |||||||||||||  ||||||||||||| ||||||||||||
Sbjct: 1003 caggtaaatacaataaggttttgtgtgaatgttgttgaattttttttaaagtgtacttaa 1062

                                                                        
Query: 860  cacagtgccc-aacgactggctgca-gtggtgaacggttaatagta-ttaaaaacaggcg 916
            |||||||||| |||||||||||||| ||||||| |||| | ||||| | |||||||||||
Sbjct: 1063 cacagtgcccaaacgactggctgcaggtggtgaccggtaattagtagtaaaaaacaggcg 1122

                                                
Query: 917  aattgta-ttatactttttcaaag-tgaacttgttt 950
            ||||||| |||||||| ||||||| |||||||||||
Sbjct: 1123 aattgtagttatacttcttcaaagttgaacttgttt 1158


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7229
Number of Sequences: 1807
Number of extensions: 7229
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 950
length of database: 10,358,551
effective HSP length: 16
effective length of query: 934
effective length of database: 10,329,639
effective search space: 9647882826
effective search space used: 9647882826
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)