BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC19ZE04FM1.SCF screened BAC_end (942 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1210 1483 0.0 >3x_Contig1210 Length = 6392 Score = 1483 bits (748), Expect = 0.0 Identities = 836/855 (97%), Gaps = 8/855 (0%) Strand = Plus / Minus Query: 89 gtgaataaattgtgagacaaagaaaaaaaagtaagaagagaaaaagttgtaaaacccttc 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5459 gtgaataaattgtgagacaaagaaaaaaaagtaagaagagaaaaagttgtaaaacccttc 5400 Query: 149 agtaatactaaaagagtcatcaaagaaaccgtgtcctaccacgtcaatagtttcggttaa 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5399 agtaatactaaaagagtcatcaaagaaaccgtgtcctaccacgtcaatagtttcggttaa 5340 Query: 209 catctttaattaaaatgggaggttggtcataacaaatatcattatatcttggtagatttt 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5339 catctttaattaaaatgggaggttggtcataacaaatatcattatatcttggtagatttt 5280 Query: 269 cgatggaactttatcattcttctcgaacggaaggaactaaagagagtagtgtctgggcat 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5279 cgatggaactttatcattcttctcgaacggaaggaactaaagagagtagtgtctgggcat 5220 Query: 329 gtttcaatgatatcgtatctctcagctaattacacttattgctttggttcaccaccttgt 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5219 gtttcaatgatatcgtatctctcagctaattacacttattgctttggttcaccaccttgt 5160 Query: 389 tggttagaagcgtcgttcttgtacatttgttcgaacaacttcatggaagcggtttgtaat 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5159 tggttagaagcgtcgttcttgtacatttgttcgaacaacttcatggaagcggtttgtaat 5100 Query: 449 tcttcagtcttggtcttcaactcttcagcgtcgacttcttcaccggcttgaactctagcg 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5099 tcttcagtcttggtcttcaactcttcagcgtcgacttcttcaccggcttgaactctagcg 5040 Query: 509 accaattctctcaaagcagcgacttggtccttaaccttttgagcttcagccttgtccaat 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5039 accaattctctcaaagcagcgacttggtccttaaccttttgagcttcagccttgtccaat 4980 Query: 569 ttttcttcgaattccttcaaagaagcttcggtatcgttggccaattggtcacccttgttg 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4979 ttttcttcgaattccttcaaagaagcttcggtatcgttggccaattggtcacccttgttg 4920 Query: 629 gcggtttcaatagccttctttctgggttcatcttgttctctgaacttttcagcatcgcta 688 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 4919 gcggtttcaatagccttctttctggtttcatcttgttctctgaacttttcagcatcgcta 4860 Query: 689 accatttgctcgatttcagattcggacaaaccgggaagaaccagc-acagtgatggaagc 747 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct: 4859 accatttgctcgatttcagattcggacaaacc-ggaagaaccagcaacagtgatggaagc 4801 Query: 748 atccttgtttggaagccttgtctctagcagagacgttgatgataccatcggcatcaatat 807 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4800 atccttg-ttggaagccttgtctctagcagagacgttgatgataccatcggcatcaata- 4743 Query: 808 tcgaaagaaacttcgatttgtgggacaacctttggagctgggtgggataccanacaaagt 867 ||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| Sbjct: 4742 tcgaaagaaacttcgatttgtgggacaccctttggagct-ggtgggataccagacaaagt 4684 Query: 868 ggaattacccgatcaacttgttgtttctgaacaattcctttttcacctttggaaaacttg 927 | | ||| |||||||||||||||| ||||| ||||| || ||||||| |||||||||| Sbjct: 4683 gaagtta-ccgatcaacttgttgtctctgaccaatt-ctctttcacc-ttggaaaactct 4627 Query: 928 tatttccacggaggt 942 |||||||||||||| Sbjct: 4626 gatttccacggaggt 4612 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8068 Number of Sequences: 1807 Number of extensions: 8068 Number of successful extensions: 59 Number of sequences better than 1.0e-20: 1 length of query: 942 length of database: 10,358,551 effective HSP length: 16 effective length of query: 926 effective length of database: 10,329,639 effective search space: 9565245714 effective search space used: 9565245714 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)