BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC19ZE06FM1.SCF screened BAC_end (974 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1618 1477 0.0 >3x_Contig1618 Length = 12146 Score = 1477 bits (745), Expect = 0.0 Identities = 771/777 (99%), Gaps = 2/777 (0%) Strand = Plus / Minus Query: 86 taactcaagctttccgtaaatcaattggtatcaagattaaggaagaaaccgaattgattg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7039 taactcaagctttccgtaaatcaattggtatcaagattaaggaagaaaccgaattgattg 6980 Query: 146 aaggtgaggttgtggaaatccagatcgatagatcaatcactggtggccataaacaaggta 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6979 aaggtgaggttgtggaaatccagatcgatagatcaatcactggtggccataaacaaggta 6920 Query: 206 aattgaccattaaaaccacagacatggaaactatttatgagttgggtaataagatgattg 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6919 aattgaccattaaaaccacagacatggaaactatttatgagttgggtaataagatgattg 6860 Query: 266 aaggtctaactaaagaaaaggttcttgctggtgatgttatctctatagataaggccagtg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6859 aaggtctaactaaagaaaaggttcttgctggtgatgttatctctatagataaggccagtg 6800 Query: 326 gcaagatcaccaaactaggtaggtccttcgcccgttctcgtgattacgatgccatgggtg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6799 gcaagatcaccaaactaggtaggtccttcgcccgttctcgtgattacgatgccatgggtg 6740 Query: 386 ccgacacaaagtttgtacagtgccctgagggtgaacttcaaaaaagaaagactgtagttc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6739 ccgacacaaagtttgtacagtgccctgagggtgaacttcaaaaaagaaagactgtagttc 6680 Query: 446 acactgtttcattgcatgaaattgatgtgataaactctcgtacacaaggtttcttggctt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6679 acactgtttcattgcatgaaattgatgtgataaactctcgtacacaaggtttcttggctt 6620 Query: 506 tgtttaccggtgacacaggtgaaatcagatccgaagttcgtgaccaaattaatacgaaag 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6619 tgtttaccggtgacacaggtgaaatcagatccgaagttcgtgaccaaattaatacgaaag 6560 Query: 566 tcgcagaatggaaagaagaaggtaaagcagaaattgttccaggtgttctcttcatcgatg 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6559 tcgcagaatggaaagaagaaggtaaagcagaaattgttccaggtgttctcttcatcgatg 6500 Query: 626 aagttcacatgctagatattgaatgtttttctttcattaaccgtgctttagaagatgagt 685 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 6499 aagttcacatgctagatattgaatgtttgtctttcattaaccgtgctttagaagatgagt 6440 Query: 686 ttgcaccaatcgtgataatggcaactaaccgtggtatttctaagacccgtggtaccaact 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6439 ttgcaccaatcgtgataatggcaactaaccgtggtatttctaagacccgtggtaccaact 6380 Query: 746 acaaatccccacatggacttcctcttgaccttttggatagatctatcataataactacca 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6379 acaaatccccacatggacttcctcttgaccttttggatagatctatcataataactacca 6320 Query: 806 agaattacgatggcaagtgaaatcagaacaatcttaacttatcagaagttcagaaga 862 ||||||||||| ||||||||||||| ||||||||||| |||||||||| ||||||| Sbjct: 6319 agaattacgat-gcaagtgaaatcaagacaatcttaac-tatcagaagtacagaaga 6265 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7246 Number of Sequences: 1807 Number of extensions: 7246 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 974 length of database: 10,358,551 effective HSP length: 16 effective length of query: 958 effective length of database: 10,329,639 effective search space: 9895794162 effective search space used: 9895794162 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)