BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC19ZF05FM1.SCF screened BAC_end
         (958 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1604                                                        1505   0.0  

>3x_Contig1604 
          Length = 15703

 Score = 1505 bits (759), Expect = 0.0
 Identities = 866/884 (97%), Gaps = 14/884 (1%)
 Strand = Plus / Minus

                                                                         
Query: 87    cttcgtcatatctaccaaactttgtagtagaatttgaagggttaagcgcaaccgctgtaa 146
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14476 cttcgtcatatctaccaaactttgtagtagaatttgaagggttaagcgcaaccgctgtaa 14417

                                                                         
Query: 147   ctattccttctagtcgtctttttgtttcttgtaattcttggtcctttctctttaatgaat 206
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14416 ctattccttctagtcgtctttttgtttcttgtaattcttggtcctttctctttaatgaat 14357

                                                                         
Query: 207   ctgataacttacaaaatattatttccagggatgccggtatctggatttcagaatcgaaag 266
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14356 ctgataacttacaaaatattatttccagggatgccggtatctggatttcagaatcgaaag 14297

                                                                         
Query: 267   taagagcctttgatttcttcattttctgctcttcttgctgcttgaaagtcaaaccctgat 326
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14296 taagagcctttgatttcttcattttctgctcttcttgctgcttgaaagtcaaaccctgat 14237

                                                                         
Query: 327   tgaatacctccttcaatttttttatctctatttctaacgattctatctgtgtctctttca 386
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14236 tgaatacctccttcaatttttttatctctatttctaacgattctatctgtgtctctttca 14177

                                                                         
Query: 387   actgtagttcaagtttgaagttgtctgatgatggctctgtttcagagtcgaaagtggtat 446
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14176 actgtagttcaagtttgaagttgtctgatgatggctctgtttcagagtcgaaagtggtat 14117

                                                                         
Query: 447   tgaatcctgagcttttagcatatgatgatctgtccattattaccgtgttatttgaagagc 506
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14116 tgaatcctgagcttttagcatatgatgatctgtccattattaccgtgttatttgaagagc 14057

                                                                         
Query: 507   ttccaggatgcgtgtttgacgaaatgcctct-cgaggactctat-ctcgggcgaattatg 564
             ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 14056 ttccaggatgcgtgtttgacgaaatgcctctgcgaggactctatgctcgggcgaattatg 13997

                                                                         
Query: 565   ttgttctatgagcggctgttcccaata-tgatgacatgc-tgctccta-tgagtagaaga 621
             ||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 13996 ttgttctatgagcggctgttcccaatagtgatgacatgcgtgctcctagtgagtagaaga 13937

                                                                         
Query: 622   tccgctcaaatggccctgaagtccttggttatagtgggagcccataccatcaatgttccc 681
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13936 tccgctcaaatggccctgaagtccttggttatagtgggagcccataccatcaatgttccc 13877

                                                                         
Query: 682   atgtaagctgaagctacctccatgt-gccatgctggagttcatgacattggcggttgtgc 740
             ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 13876 atgtaagctgaagctacctccatgtggccatgctggagttcatgacattggcggttgtgc 13817

                                                                         
Query: 741   catacaatttggactcgtcagaactaccaanattcagattggcgaaagagttatccaaac 800
             |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 13816 catacaatttggactcgtcagaactaccaaaattcagattggcgaaagagttatccaaac 13757

                                                                         
Query: 801   tctgttggttatattcaggttgctacacgatnacattgacctgttagtaaaaggttaa-t 859
             ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 13756 tctgttggttatattcaggttgctacacgataacattgacctgttagtaaaaggttaatt 13697

                                                                         
Query: 860   atgagttagaaaca-ttatagtctc-attttgttgttccatg-ttcata-aaaacaggna 915
             |||||||||||||| |||||||||| |||| ||||||||||| |||||| |||||||| |
Sbjct: 13696 atgagttagaaacatttatagtctcaatttggttgttccatgtttcatagaaaacaggga 13637

                                                         
Query: 916   cagac-gaaacag-attgatt-aaaatgtgtcatgtaggcaatc 956
             ||||| ||||||| ||||||| ||||||||||||||||||||||
Sbjct: 13636 cagacagaaacagtattgattaaaaatgtgtcatgtaggcaatc 13593


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6600
Number of Sequences: 1807
Number of extensions: 6600
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 958
length of database: 10,358,551
effective HSP length: 16
effective length of query: 942
effective length of database: 10,329,639
effective search space: 9730519938
effective search space used: 9730519938
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)