BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC19ZF05RM1.SCF screened BAC_end (973 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1490 1677 0.0 >3x_Contig1490 Length = 9411 Score = 1677 bits (846), Expect = 0.0 Identities = 908/925 (98%), Gaps = 4/925 (0%) Strand = Plus / Plus Query: 44 gcttaaccttgagtgagtgaattattcgagaatgtactggtttatactggaaaagtaatg 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 gcttaaccttgagtgagtgaattattcgagaatgtactggtttatactggaaaagtaatg 815 Query: 104 tagttgttagagctttgtttgtctgtgaattgggcaatactaaagctgggactggtaccg 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 tagttgttagagctttgtttgtctgtgaattgggcaatactaaagctgggactggtaccg 875 Query: 164 ggagataggggttgaggtatattttgctttgctattagttttcttaataaggtgatttta 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 876 ggagataggggttgaggtatattttgctttgctattagttttcttaataaggtgatttta 935 Query: 224 gggtatcttttgatagatgcttatagaaagaataggtgaaaaaaaaagtttatagaatat 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 936 gggtatcttttgatagatgcttatagaaagaataggtgaaaaaaaaagtttatagaatat 995 Query: 284 aagcgtagtgaagaggtatataaagggagaccatccgaagaatcatttgttgagtgcttc 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 996 aagcgtagtgaagaggtatataaagggagaccatccgaagaatcatttgttgagtgcttc 1055 Query: 344 ctgctttggaattcaattacatcaattgtatcaatagtggtctatctgatagaaataaac 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1056 ctgctttggaattcaattacatcaattgtatcaatagtggtctatctgatagaaataaac 1115 Query: 404 aacaattgtcaggatcatcaaacgcatcaacagtttattgtctagaaagaagatattact 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1116 aacaattgtcaggatcatcaaacgcatcaacagtttattgtctagaaagaagatattact 1175 Query: 464 acaatgaacgacgaaacacaatttacaaataaggccaacgaaattatccgtttggcccag 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1176 acaatgaacgacgaaacacaatttacaaataaggccaacgaaattatccgtttggcccag 1235 Query: 524 aaattggctcaggatcacagacatgctcagttacaaccaattcacttacttgctgcattt 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1236 aaattggctcaggatcacagacatgctcagttacaaccaattcacttacttgctgcattt 1295 Query: 584 gttgagccaaacgaggatggttctgttggattcttacaaaacttggtggaattagcgaaa 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1296 gttgagccaaacgaggatggttctgttggattcttacaaaacttggtggaattagcgaaa 1355 Query: 644 tatgattatgaacctttgaaaagggccatcaacagaaacctagtcaggactccatctcag 703 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1356 tatgattatgaacctttgaaaagggccatcaacagaaacctagtcaggactccatctcag 1415 Query: 704 acgcccgcaccattagaaattcagccaagttatgctttcgggcaggtctttgaagatact 763 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1416 acgcccgcaccattagaaattcagccaagttatgctttcgggcaggtcttgaaagatact 1475 Query: 764 tcagaaaattaggaaacagcanaaagattcattcgtcggtcaagatcatatattgactgc 823 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1476 tcag-aaattaggaaacagcaaaaagattcattcgtcggtcaagatcatatattgactgc 1534 Query: 824 tttgntc-aagatgcaacaactcanagcatttttaa-gagtgttccattgacatagaatc 881 |||| || |||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 1535 tttgttcaaagatgcaacaactcaaagcatttttaaggagtgttccattgacatagaatc 1594 Query: 882 tgtgaagcagcagatgctcgaattgagagggcatcacggatttgattcaagagacgctgn 941 |||||||||||||||||||||||||||||| |||| || |||||||||||||||||| Sbjct: 1595 tgtgaagcagcagatgctcgaattgagaggcaatcaacgaattgattcaagagacgctga 1654 Query: 942 tncaaaatgaaaaatggggatattt 966 | | |||||||||||||| |||||| Sbjct: 1655 tac-aaatgaaaaatgggaatattt 1678 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7909 Number of Sequences: 1807 Number of extensions: 7909 Number of successful extensions: 51 Number of sequences better than 1.0e-20: 1 length of query: 973 length of database: 10,358,551 effective HSP length: 16 effective length of query: 957 effective length of database: 10,329,639 effective search space: 9885464523 effective search space used: 9885464523 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)