BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC19ZF12RM1.SCF screened BAC_end (961 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig788 1602 0.0 >3x_Contig788 Length = 2349 Score = 1602 bits (808), Expect = 0.0 Identities = 843/851 (99%), Gaps = 3/851 (0%) Strand = Plus / Plus Query: 50 ccatataacttccgcattc-atggatgcgatttgatatcatctggcccgctttgtaagtt 108 |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 269 ccatataacttccgcaaaccatggatgcgatttgatatcatctggcccgctttgtaagtt 328 Query: 109 acctaatctacgggtcaaatctgcagtgatcaacttacctaatagatccacaacatcagg 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329 acctaatctacgggtcaaatctgcagtgatcaacttacctaatagatccacaacatcagg 388 Query: 169 gtggaaaaatggtggataaacgacttcaccagctaagattttctcataggtcttcattgg 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 gtggaaaaatggtggataaacgacttcaccagctaagattttctcataggtcttcattgg 448 Query: 229 cgtaacatcataaaatggagtataaccagcgagcatttcgaagattaagattccaagaga 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 cgtaacatcataaaatggagtataaccagcgagcatttcgaagattaagattccaagaga 508 Query: 289 ccaccagtcaacagacttgttatatggtttcgttgtaattacttcaggagcaatgtaatc 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 ccaccagtcaacagacttgttatatggtttcgttgtaattacttcaggagcaatgtaatc 568 Query: 349 aggggtaccacataacgtccacgtcactgtgattacctctttggcgaacccaaaatccgt 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 aggggtaccacataacgtccacgtcactgtgattacctctttggcgaacccaaaatccgt 628 Query: 409 tatcttgatatgcccattcctatccaatagaatgttttctggcttcaagtcacggtatat 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 tatcttgatatgcccattcctatccaatagaatgttttctggcttcaagtcacggtatat 688 Query: 469 tatgttatgagaatgtaagtattccaaagctaaagtcacctctgctgcataaaacttagc 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 tatgttatgagaatgtaagtattccaaagctaaagtcacctctgctgcataaaacttagc 748 Query: 529 cacagggttggggaatcgttgggattttctgagcaacgagaacaattcaccaccttcgat 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 cacagggttggggaatcgttgggattttctgagcaacgagaacaattcaccaccttcgat 808 Query: 589 ataatccataaccatgaatagattacgagaatcctggaacgtaccccacatccgaattaa 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 809 ataatccataaccatgaatagattacgagaatcctggaacgtaccccacatccgaattaa 868 Query: 649 gaaaggatgttcaaccagctttaacatccgtctttcatcattcgtatgctcaatttgctt 708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 869 gaaaggatgttcaaccagctttaacatccgtctttcatcattcgtatgctcaatttgctt 928 Query: 709 cattcgaatgatntgatgttttttcaaaactttgatggcatagtaacgtccattgtgcac 768 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 929 cattcgaatgatttgatgttttttcaaaactttgatggcatagtaacgtccattgtgcac 988 Query: 769 actcctcacgagatgcactctaccgaatgaccctgttccccatgtacgcatgatttgaaa 828 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 989 actcctcacgagatgcactctaccgaatgaccctgttcccaatgtacgcatgatttgaaa 1048 Query: 829 atcatgc-acgtatatttccccttagacacagtagacctttgaggc-acaacgattcctt 886 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1049 atcatgcaacgtatatttccccttagacacagtagacctttgaggcaacaacgattcctt 1108 Query: 887 ttgctgagcca 897 |||||||||| Sbjct: 1109 ctgctgagcca 1119 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5140 Number of Sequences: 1807 Number of extensions: 5140 Number of successful extensions: 29 Number of sequences better than 1.0e-20: 1 length of query: 961 length of database: 10,358,551 effective HSP length: 16 effective length of query: 945 effective length of database: 10,329,639 effective search space: 9761508855 effective search space used: 9761508855 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)